Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq82 84.2 2e-14
>seq82
Length=29176
Score = 84.2 bits (92), Expect = 2e-14
Identities = 117/162 (72%), Gaps = 13/162 (8%)
Strand=Plus/Minus
Query 32 CGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGA-TTGGCACATACGAATTGATCC 90
||| ||| |||||| | |||||||||||| |||||| ||||| | | | |||||||
Sbjct 29176 CGATGAAAGACGTGGAAGCCTGCGAAAAGCTTCGGGGAGCTGGCAAACAAGCTTTGATCC 29117
Query 91 GTAGATATCCGAATGGGGCAACCCGATATATTGGAGATATATCA----TAACGCTAGGC- 145
| ||||||| |||||||| |||||| |||| ||||| ||| |||| | |
Sbjct 29116 GGAGATATCTGAATGGGGAAACCCGGCCTATTTTAGATAGGTCATTGTTAACTGAATACA 29057
Query 146 ---GTT----AGGCGAACGTGGGGAACTGAAACATCTAAGTA 180
||| | |||||| |||||||||||||||||||||
Sbjct 29056 TAGGTTAACAAAGCGAACCGAGGGAACTGAAACATCTAAGTA 29015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476799524243
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |