Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq82 84.2 2e-14 >seq82 Length=29176 Score = 84.2 bits (92), Expect = 2e-14 Identities = 117/162 (72%), Gaps = 13/162 (8%) Strand=Plus/Minus Query 32 CGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGA-TTGGCACATACGAATTGATCC 90 ||| ||| |||||| | |||||||||||| |||||| ||||| | | | ||||||| Sbjct 29176 CGATGAAAGACGTGGAAGCCTGCGAAAAGCTTCGGGGAGCTGGCAAACAAGCTTTGATCC 29117 Query 91 GTAGATATCCGAATGGGGCAACCCGATATATTGGAGATATATCA----TAACGCTAGGC- 145 | ||||||| |||||||| |||||| |||| ||||| ||| |||| | | Sbjct 29116 GGAGATATCTGAATGGGGAAACCCGGCCTATTTTAGATAGGTCATTGTTAACTGAATACA 29057 Query 146 ---GTT----AGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 ||| | |||||| ||||||||||||||||||||| Sbjct 29056 TAGGTTAACAAAGCGAACCGAGGGAACTGAAACATCTAAGTA 29015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476799524243