Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq37 163 5e-38 seq41 80.6 4e-13 >seq37 Length=4018383 Score = 163 bits (180), Expect = 5e-38 Identities = 112/124 (90%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 107 TCTAAGAAGCCAGCCACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGT 165 |||||||||||||| | ||| || | || ||||||||||||||||||||||||||| Sbjct 3202730 TCTAAGAAGCCAGCGTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGT 3202788 Query 166 TCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA 225 ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 3202789 TCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA 3202848 Query 226 CCCA 229 |||| Sbjct 3202849 CCCA 3202852 >seq41 Length=1307349 Score = 80.6 bits (88), Expect = 4e-13 Identities = 98/130 (75%), Gaps = 9/130 (7%) Strand=Plus/Minus Query 136 ATGGGGCTATTTAGCAGGTTAAGGT----CTCGTTCGTTATCGGAATTAACCAGACAAAT 191 || |||||||| |||||||| |||| || |||||||||| ||| || | | |||| Sbjct 718807 ATCGGGCTATTCAGCAGGTTTAGGTAGGTCTAGTTCGTTATCCCAATCAAGCGTATAAAT 718748 Query 192 CACTCCACCAACTAAGAACGGCCAT---GCACCAC-CACCCATAGAATC-AAGAAAGAGC 246 ||||||||| |||| ||||||| || |||||| ||| | ||| | |||| |||| Sbjct 718747 CACTCCACCGACTAGGAACGGCTATATGCCACCACGCACGAAACGAAACTCAGAAGGAGC 718688 Query 247 TATCAATCTG 256 | |||||||| Sbjct 718687 TCTCAATCTG 718678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799204943