Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq82 131 6e-28 >seq82 Length=29176 Score = 131 bits (144), Expect = 6e-28 Identities = 122/154 (79%), Gaps = 1/154 (1%) Strand=Plus/Plus Query 446 AGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTA 504 |||||| || | ||||| ||| | |||||||||| |||||||||||||| | | ||||| Sbjct 28678 AGCTCCTACTGCTTGTACGCAGACGGTTTCAGGTTCTATTTCACTCCCCTCACCGGGGTT 28737 Query 505 CTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTT 564 |||||| |||||||||||||||||| || | |||||||||| |||||||||| ||| Sbjct 28738 CTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCGAGAGTATTTAGCCTT 28797 Query 565 AACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598 || ||||||| ||| |||| || ||||| Sbjct 28798 GGAGGATGGTCCCCCCATCTTCAGACAGGATTTC 28831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817598127872