Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq82 289 7e-76 >seq82 Length=29176 Score = 289 bits (320), Expect = 7e-76 Identities = 199/222 (90%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA-AAG-TGGGCTCCCAC 256 ||| | | ||||||||||||||||||||||||||||||||| | ||| || ||||| || Sbjct 28627 TAACTTGGTGACCCATTATACAAAAGGTACGCAGTCACCCATCCGAAGATGAGCTCCTAC 28686 Query 257 TGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCC 316 |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 28687 TGCTTGTACGCAGACGGTTTCAGGTTCTATTTCACTCCCCTCACCGGGGTTCTTTTCGCC 28746 Query 317 TTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGG 376 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct 28747 TTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCGAGAGTATTTAGCCTTGGAGGATGG 28806 Query 377 TCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||||||||| |||||||| ||||||||| ||| |||||| Sbjct 28807 TCCCCCCATCTTCAGACAGGATTTCTCGTGACCCGCCCTACT 28848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241598721152