Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq82 219 8e-55
>seq82
Length=29176
Score = 219 bits (242), Expect = 8e-55
Identities = 223/291 (77%), Gaps = 6/291 (2%)
Strand=Plus/Minus
Query 34 CGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAGTGAGCAAACACACTTTGATCC 93
||||||| ||||| | ||| ||||| ||||| ||||||| ||||||| |||||||||
Sbjct 29176 CGATGAAAGACGTGGAAGCCTGCGAAAAGCTTCGGGGAGCTGGCAAACAAGCTTTGATCC 29117
Query 94 GCAGATTTCCGAATGGGGAAACCCGGCCCTTTG------GGTCATTGCATGCTGAATACA 147
| |||| || |||||||||||||||||| || |||||||| |||||||||
Sbjct 29116 GGAGATATCTGAATGGGGAAACCCGGCCTATTTTAGATAGGTCATTGTTAACTGAATACA 29057
Query 148 TAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATC 207
||||| |||||||||| | ||||||||||||||||||| || |||||||||||||
Sbjct 29056 TAGGTTAACAAAGCGAACCGAGGGAACTGAAACATCTAAGTACCTCGAGGAAAAGAAATC 28997
Query 208 AACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCTTTACGAGATAGTTGAA 267
|| ||||||| |||||| |||||||||| ||| ||||||| ||||| || ||
Sbjct 28996 AAATGAGATTCTGCAAGTAGCGGCGAGCGAACGTGGAAGAGCCTTCACGAGCTAATTAGT 28937
Query 268 TTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCCCCGT 318
| ||| || |||||||| | |||| || |||||||||||||||
Sbjct 28936 AGGTTAGCCAAAAGGTCTGGAAAGACCTGCCAAAGAGGGTGATAGCCCCGT 28886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918399054048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |