Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq82 219 8e-55 >seq82 Length=29176 Score = 219 bits (242), Expect = 8e-55 Identities = 223/291 (77%), Gaps = 6/291 (2%) Strand=Plus/Minus Query 34 CGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAGTGAGCAAACACACTTTGATCC 93 ||||||| ||||| | ||| ||||| ||||| ||||||| ||||||| ||||||||| Sbjct 29176 CGATGAAAGACGTGGAAGCCTGCGAAAAGCTTCGGGGAGCTGGCAAACAAGCTTTGATCC 29117 Query 94 GCAGATTTCCGAATGGGGAAACCCGGCCCTTTG------GGTCATTGCATGCTGAATACA 147 | |||| || |||||||||||||||||| || |||||||| ||||||||| Sbjct 29116 GGAGATATCTGAATGGGGAAACCCGGCCTATTTTAGATAGGTCATTGTTAACTGAATACA 29057 Query 148 TAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATC 207 ||||| |||||||||| | ||||||||||||||||||| || ||||||||||||| Sbjct 29056 TAGGTTAACAAAGCGAACCGAGGGAACTGAAACATCTAAGTACCTCGAGGAAAAGAAATC 28997 Query 208 AACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCTTTACGAGATAGTTGAA 267 || ||||||| |||||| |||||||||| ||| ||||||| ||||| || || Sbjct 28996 AAATGAGATTCTGCAAGTAGCGGCGAGCGAACGTGGAAGAGCCTTCACGAGCTAATTAGT 28937 Query 268 TTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCCCCGT 318 | ||| || |||||||| | |||| || ||||||||||||||| Sbjct 28936 AGGTTAGCCAAAAGGTCTGGAAAGACCTGCCAAAGAGGGTGATAGCCCCGT 28886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918399054048