Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq37 302 4e-77 seq54 217 1e-51 >seq37 Length=4018383 Score = 302 bits (334), Expect = 4e-77 Identities = 627/927 (68%), Gaps = 6/927 (1%) Strand=Plus/Minus Query 66001 GGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGAC 66060 ||||||||| ||||| || ||||| |||||||| | ||| ||||| || ||||||| Sbjct 714948 GGGAAGGGCGAGAGAGGCAAGGTTACAGACAGCAACCTCATCAGGGGCACAGTACTCGAT 714889 Query 66061 AATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCG 66120 || || |||||||| || || ||| ||||| |||| |||| || || |||||||| Sbjct 714888 GATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCG 714829 Query 66121 ATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180 ||||| ||||||||| | |||| | || | || ||||| || | ||| | ||| Sbjct 714828 GTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCGAGGAT 714769 Query 66181 GGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAAT 66239 ||| | ||| || | ||||||| || | | | |||| | | | || || | Sbjct 714768 GGCATACCAGAGCTTCTGGGCCTTCATGGT-CTTGCGACCCTTGCCGGCCTTCTCATACT 714710 Query 66240 GTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTG 66299 ||||| || ||||| ||||| | |||| |||| ||||||| || | Sbjct 714709 TCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGACCGGGACACTCGTTGG 714650 Query 66300 GACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCC 66359 |||||||||| | ||| ||||| | || || ||||| ||| || ||||| || |||| Sbjct 714649 GACACATCAGAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCC 714590 Query 66360 AGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGT 66419 |||| || ||| | ||||| || || ||| || ||||||| || ||||||| || Sbjct 714589 AGAGAGCCAGGAACAAGTCGCGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGT 714530 Query 66420 CGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATAC 66479 | ||||||||||||| || || ||||| || || ||||||||||| || | || | Sbjct 714529 CAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCAGGTC 714470 Query 66480 GTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTA 66539 | ||| |||||| || |||||||| || || |||||||||||||| | ||| || Sbjct 714469 GCTTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGAAGCATAGGGG 714410 Query 66540 CGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGT 66599 | ||||| || | || ||||| ||| ||||| ||| || || || || || Sbjct 714409 TAACACCGTTGGAGGTACCGTTGGTACCGGCGATGTAGGAGCCAGTGGCACGGATTCGGT 714350 Query 66600 GAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGT 66657 | || ||||||||||||||||| ||| |||| || || ||||| || | | | | Sbjct 714349 GCACGTTCAGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGAGTAT 714290 Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717 | |||| || ||||| ||| |||| ||| | ||| ||||||| || || Sbjct 714289 CATAAATA--CCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCTG 714232 Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGA 66777 || | ||| || | || |||||||||||| | || || || ||| | | || || Sbjct 714231 AGGCTGGGGAGTACCCGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCGA 714172 Query 66778 CATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACA 66837 |||| ||||| ||||||| |||| |||||||| || || || |||| ||| Sbjct 714171 CATGAGGTTGTAAGTCTCGAGGACACGCTCAATGTTGTCACCCCAGATGCCGACAGCAAC 714112 Query 66838 TCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGA 66897 ||||| | | || || || || || || | | | | || | | | |||||| Sbjct 714111 ACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTGCCATCAATCTTGAGGAGGTAGGA 714052 Query 66898 GCGTTCCAGGGTCTTGATACCAAAGTA 66924 || || || ||||||| |||||||| Sbjct 714051 TCGCTCAAGAGTCTTGAAGCCAAAGTA 714025 Score = 98.7 bits (108), Expect = 8e-16 Identities = 314/477 (66%), Gaps = 14/477 (3%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| |||||||| || | | ||| || |||| || | || ||||||||||| || Sbjct 715854 ATCGACAGTGAACTGAATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGT 715795 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGC 65194 ||| || || | | | ||| ||| ||||| | || | || |||| | | || Sbjct 715794 CTTCAGACC-GAGCTTCCAGCCGGCAAAGTGCAT-GCTGGTGATCTTGCCCATGGTGGGG 715737 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || || | ||||| |||||| ||| | ||| || || || ||| Sbjct 715736 TCCTTCATGTGGATGTTGAGAGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCTGCC 715677 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | | || | || || |||||||| ||||||||||| || | | | ||||| Sbjct 715676 ATCTGGACGACCTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGA-GCCTTGACCTC 715618 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 | || || | |||| ||||| ||||| ||||| || || || ||| Sbjct 715617 AGCGGGGATGTTGGGGATGTTCTGGATGGAACCGTTCTCAGCAATGATTCGGTTCTTCAT 715558 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGA---ACCAAGTGACGATTGATGA 65429 || || ||||||| |||| ||||| |||| |||| |||| | | || | || Sbjct 715557 GGAATCCGACCACAGGCCCATATCGACGAGATCCTTGAGCAACCAGGGG----TTAACGA 715502 Query 65430 CTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489 | ||||||||||| | || |||||||| ||||||||||| ||| || || ||| Sbjct 715501 CCTGGAACTCGCCAGCGAGGACACGACGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGC 715442 Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACA 65546 | || |||| || || || || | ||| ||||| |||||||| || | || || Sbjct 715441 ACTCGTTGTTACCCAGGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAGCAGCA 715385 >seq54 Length=1261221 Score = 217 bits (240), Expect = 1e-51 Identities = 570/859 (66%), Gaps = 28/859 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | ||| || Sbjct 1146009 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTG 1145950 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || | || | ||| | || ||| | | Sbjct 1145949 TCCAAGGATCTCCACGACTGGAACAACCGCCT---GACCTCTGACGAGCAGTTCTTCATC 1145893 Query 61204 ---CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260 || | | || ||||| ||||| || ||||| |||||||| |||||| | | || Sbjct 1145892 TCTCACATCCTTGCCTTCTTCGCCGCCTCTGACGGCATCGTCAACGAGAATCTTGTTGAG 1145833 Query 61261 CGTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319 || ||| || | ||||| || | | ||||| || || ||||||||||||||||| Sbjct 1145832 CGATTCA-GCGGCGAGGTTCAGATCCCCGAGGCTCGATGCTTCTACGGCTTCCAGATCAT 1145774 Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379 |||||||| ||||||| |||| ||| | ||||| || || ||||||| ||||| Sbjct 1145773 GATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGACACCTACATCAAGGAGCC 1145714 Query 61380 GGCGGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGC----GG 61434 | | || | | || | ||||| ||||| ||||| || || || | | | Sbjct 1145713 TTCTCAGCG-AACCTATCTCTTCAACGCCATTGAGACCATCCC----TTGCATCCGCAAG 1145659 Query 61435 AAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGAT 61492 || || || ||||| ||| ||||| |||| |||| | || | |||| | | || Sbjct 1145658 AAGGCCGACTGGGCTATCAGATGGAT--CCAGGACAAGGACTCTTCCTTTGCTCAGCGTC 1145601 Query 61493 TGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTT 61552 | | || || || | ||||||||| | || |||||||| | ||||| | ||||| | Sbjct 1145600 TCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGTGGTGCCTTTGCTTCCATCTTCT 1145541 Query 61553 GGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCG 61612 || | ||||| ||||| || |||||||||||||||||| ||| ||| | || || || | Sbjct 1145540 GGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTG 1145481 Query 61613 ACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTC 61672 | ||||| | || || ||||| | || || | | | || | ||| Sbjct 1145480 ATGAGGGTCTTCACACCGACTTTGC---CTGCCTCCTCCACTCCCACCTCAAGGGCCGTG 1145424 Query 61673 CGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732 | || || | || || | ||| || || || || || ||||| || | Sbjct 1145423 CCAGCAAGCAGATCATCCAGGACATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCC 1145364 Query 61733 TGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792 ||||||| ||| | ||| | | ||| |||||||||| || ||| |||||| | Sbjct 1145363 TGACTGAGGCTCTCCCCTGCGCCCTCCTCGGCATGAACGCCAACCTCATGAAGCAGTACA 1145304 Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGA 61852 | || || || ||||||||||| | |||| |||| | || | |||| || | Sbjct 1145303 TCGAGTTCGTCGCCGACCGTCTCCTCGTCGCCCTGGGCAACGAGAAGGTCTACAAGTCTG 1145244 Query 61853 AAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912 ||||| || || |||||||| | || || |||| ||||||||| || || ||||||| Sbjct 1145243 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGA 1145184 Query 61913 AACGTGTAGGCGACTATCA 61931 | ||||| || ||||| || Sbjct 1145183 AGCGTGTCGGTGACTACCA 1145165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567500927920