Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04-
27] 103 sequences; 46,940,970 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq37 302 4e-77
seq54 217 1e-51
>seq37
Length=4018383
Score = 302 bits (334), Expect = 4e-77
Identities = 627/927 (68%), Gaps = 6/927 (1%)
Strand=Plus/Minus
Query 66001 GGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGAC 66060
||||||||| ||||| || ||||| |||||||| | ||| ||||| || |||||||
Sbjct 714948 GGGAAGGGCGAGAGAGGCAAGGTTACAGACAGCAACCTCATCAGGGGCACAGTACTCGAT 714889
Query 66061 AATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCG 66120
|| || |||||||| || || ||| ||||| |||| |||| || || ||||||||
Sbjct 714888 GATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCG 714829
Query 66121 ATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180
||||| ||||||||| | |||| | || | || ||||| || | ||| | |||
Sbjct 714828 GTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCGAGGAT 714769
Query 66181 GGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAAT 66239
||| | ||| || | ||||||| || | | | |||| | | | || || |
Sbjct 714768 GGCATACCAGAGCTTCTGGGCCTTCATGGT-CTTGCGACCCTTGCCGGCCTTCTCATACT 714710
Query 66240 GTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTG 66299
||||| || ||||| ||||| | |||| |||| ||||||| || |
Sbjct 714709 TCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGACCGGGACACTCGTTGG 714650
Query 66300 GACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCC 66359
|||||||||| | ||| ||||| | || || ||||| ||| || ||||| || ||||
Sbjct 714649 GACACATCAGAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCC 714590
Query 66360 AGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGT 66419
|||| || ||| | ||||| || || ||| || ||||||| || ||||||| ||
Sbjct 714589 AGAGAGCCAGGAACAAGTCGCGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAGGT 714530
Query 66420 CGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATAC 66479
| ||||||||||||| || || ||||| || || ||||||||||| || | || |
Sbjct 714529 CAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCAGGTC 714470
Query 66480 GTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTA 66539
| ||| |||||| || |||||||| || || |||||||||||||| | ||| ||
Sbjct 714469 GCTTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGAAGCATAGGGG 714410
Query 66540 CGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGT 66599
| ||||| || | || ||||| ||| ||||| ||| || || || || ||
Sbjct 714409 TAACACCGTTGGAGGTACCGTTGGTACCGGCGATGTAGGAGCCAGTGGCACGGATTCGGT 714350
Query 66600 GAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGT 66657
| || ||||||||||||||||| ||| |||| || || ||||| || | | | |
Sbjct 714349 GCACGTTCAGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGAGTAT 714290
Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717
| |||| || ||||| ||| |||| ||| | ||| ||||||| || ||
Sbjct 714289 CATAAATA--CCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCTG 714232
Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGA 66777
|| | ||| || | || |||||||||||| | || || || ||| | | || ||
Sbjct 714231 AGGCTGGGGAGTACCCGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCGA 714172
Query 66778 CATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACA 66837
|||| ||||| ||||||| |||| |||||||| || || || |||| |||
Sbjct 714171 CATGAGGTTGTAAGTCTCGAGGACACGCTCAATGTTGTCACCCCAGATGCCGACAGCAAC 714112
Query 66838 TCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGA 66897
||||| | | || || || || || || | | | | || | | | ||||||
Sbjct 714111 ACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTGCCATCAATCTTGAGGAGGTAGGA 714052
Query 66898 GCGTTCCAGGGTCTTGATACCAAAGTA 66924
|| || || ||||||| ||||||||
Sbjct 714051 TCGCTCAAGAGTCTTGAAGCCAAAGTA 714025
Score = 98.7 bits (108), Expect = 8e-16
Identities = 314/477 (66%), Gaps = 14/477 (3%)
Strand=Plus/Minus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
|||||| |||||||| || | | ||| || |||| || | || ||||||||||| ||
Sbjct 715854 ATCGACAGTGAACTGAATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGT 715795
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGC 65194
||| || || | | | ||| ||| ||||| | || | || |||| | | ||
Sbjct 715794 CTTCAGACC-GAGCTTCCAGCCGGCAAAGTGCAT-GCTGGTGATCTTGCCCATGGTGGGG 715737
Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254
|| || || || || | ||||| |||||| ||| | ||| || || || |||
Sbjct 715736 TCCTTCATGTGGATGTTGAGAGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCTGCC 715677
Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313
|| | | || | || || |||||||| ||||||||||| || | | | |||||
Sbjct 715676 ATCTGGACGACCTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGA-GCCTTGACCTC 715618
Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373
| || || | |||| ||||| ||||| ||||| || || || |||
Sbjct 715617 AGCGGGGATGTTGGGGATGTTCTGGATGGAACCGTTCTCAGCAATGATTCGGTTCTTCAT 715558
Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGA---ACCAAGTGACGATTGATGA 65429
|| || ||||||| |||| ||||| |||| |||| |||| | | || | ||
Sbjct 715557 GGAATCCGACCACAGGCCCATATCGACGAGATCCTTGAGCAACCAGGGG----TTAACGA 715502
Query 65430 CTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489
| ||||||||||| | || |||||||| ||||||||||| ||| || || |||
Sbjct 715501 CCTGGAACTCGCCAGCGAGGACACGACGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGC 715442
Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACA 65546
| || |||| || || || || | ||| ||||| |||||||| || | || ||
Sbjct 715441 ACTCGTTGTTACCCAGGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAGCAGCA 715385
>seq54
Length=1261221
Score = 217 bits (240), Expect = 1e-51
Identities = 570/859 (66%), Gaps = 28/859 (3%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| | ||| ||
Sbjct 1146009 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTG 1145950
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
||||| || | | |||||| | || | || | ||| | || ||| | |
Sbjct 1145949 TCCAAGGATCTCCACGACTGGAACAACCGCCT---GACCTCTGACGAGCAGTTCTTCATC 1145893
Query 61204 ---CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260
|| | | || ||||| ||||| || ||||| |||||||| |||||| | | ||
Sbjct 1145892 TCTCACATCCTTGCCTTCTTCGCCGCCTCTGACGGCATCGTCAACGAGAATCTTGTTGAG 1145833
Query 61261 CGTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319
|| ||| || | ||||| || | | ||||| || || |||||||||||||||||
Sbjct 1145832 CGATTCA-GCGGCGAGGTTCAGATCCCCGAGGCTCGATGCTTCTACGGCTTCCAGATCAT 1145774
Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379
|||||||| ||||||| |||| ||| | ||||| || || ||||||| |||||
Sbjct 1145773 GATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGACACCTACATCAAGGAGCC 1145714
Query 61380 GGCGGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGC----GG 61434
| | || | | || | ||||| ||||| ||||| || || || | | |
Sbjct 1145713 TTCTCAGCG-AACCTATCTCTTCAACGCCATTGAGACCATCCC----TTGCATCCGCAAG 1145659
Query 61435 AAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGAT 61492
|| || || ||||| ||| ||||| |||| |||| | || | |||| | | ||
Sbjct 1145658 AAGGCCGACTGGGCTATCAGATGGAT--CCAGGACAAGGACTCTTCCTTTGCTCAGCGTC 1145601
Query 61493 TGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTT 61552
| | || || || | ||||||||| | || |||||||| | ||||| | ||||| |
Sbjct 1145600 TCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGTGGTGCCTTTGCTTCCATCTTCT 1145541
Query 61553 GGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCG 61612
|| | ||||| ||||| || |||||||||||||||||| ||| ||| | || || || |
Sbjct 1145540 GGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTG 1145481
Query 61613 ACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTC 61672
| ||||| | || || ||||| | || || | | | || | |||
Sbjct 1145480 ATGAGGGTCTTCACACCGACTTTGC---CTGCCTCCTCCACTCCCACCTCAAGGGCCGTG 1145424
Query 61673 CGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732
| || || | || || | ||| || || || || || ||||| || |
Sbjct 1145423 CCAGCAAGCAGATCATCCAGGACATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCC 1145364
Query 61733 TGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792
||||||| ||| | ||| | | ||| |||||||||| || ||| |||||| |
Sbjct 1145363 TGACTGAGGCTCTCCCCTGCGCCCTCCTCGGCATGAACGCCAACCTCATGAAGCAGTACA 1145304
Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGA 61852
| || || || ||||||||||| | |||| |||| | || | |||| || |
Sbjct 1145303 TCGAGTTCGTCGCCGACCGTCTCCTCGTCGCCCTGGGCAACGAGAAGGTCTACAAGTCTG 1145244
Query 61853 AAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912
||||| || || |||||||| | || || |||| ||||||||| || || |||||||
Sbjct 1145243 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGA 1145184
Query 61913 AACGTGTAGGCGACTATCA 61931
| ||||| || ||||| ||
Sbjct 1145183 AGCGTGTCGGTGACTACCA 1145165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567500927920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |