Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31]
107 sequences; 53,748,257 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq82 95.1 4e-17
>seq82
Length=51979
Score = 95.1 bits (104), Expect = 4e-17
Identities = 141/198 (71%), Gaps = 4/198 (2%)
Strand=Plus/Minus
Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354
|||||| | | ||| |||||||| || | || | ||||||| | |||||| |||
Sbjct 25933 GGGGACAAAGACAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATTC 25874
Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413
| | |||||| | || ||| | || | |||| |||| || ||| | | | | | ||
Sbjct 25873 CTAAACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCAAAAAATAGGATATAAATT 25814
Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470
||||||||||||| || ||||||||||||| | ||| ||||||||||| |||
Sbjct 25813 TTAAGGATTGTAGTCTGAAATTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATC 25754
Query 471 AGCATGCTACGGTGAATA 488
| |||| ||||||||||
Sbjct 25753 ACCATGTCACGGTGAATA 25736
Score = 95.1 bits (104), Expect = 4e-17
Identities = 141/198 (71%), Gaps = 4/198 (2%)
Strand=Plus/Minus
Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354
|||||| | | ||| |||||||| || | || | ||||||| | |||||| |||
Sbjct 29736 GGGGACAAAGACAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATTC 29677
Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413
| | |||||| | || ||| | || | |||| |||| || ||| | | | | | ||
Sbjct 29676 CTAAACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCAAAAAATAGGATATAAATT 29617
Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470
||||||||||||| || ||||||||||||| | ||| ||||||||||| |||
Sbjct 29616 TTAAGGATTGTAGTCTGAAATTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATC 29557
Query 471 AGCATGCTACGGTGAATA 488
| |||| ||||||||||
Sbjct 29556 ACCATGTCACGGTGAATA 29539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503998390720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |