Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 4e-14 >seq1 Length=2505574 Score = 84.2 bits (92), Expect = 4e-14 Identities = 111/150 (74%), Gaps = 3/150 (2%) Strand=Plus/Plus Query 19 AATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCT 78 |||| ||| ||||| |||||| | | ||| || ||| ||| | ||||||| || | Sbjct 178947 AATTTAGA-TAATTAGTTTTTATAGTTATCTAACTAGGTAGTACTATAAAGCTACTATTT 179005 Query 79 GCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTC 138 || ||| || ||| || |||||||||| |||||| ||||||||||| ||||| | | | Sbjct 179006 ACTAGATAATAGCTAAATGCCTCTAAGTTAGAATCTATGCCAGAACGCGGTGA-TATTGC 179064 Query 139 CTGCACATCGTAGTCGGATACGAATAGGCT 168 || |||| ||| |||| ||||||||| Sbjct 179065 CTATACAT-ATAGATAGATAAGAATAGGCT 179093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199150848