Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31]
107 sequences; 53,748,257 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1 84.2 4e-14
>seq1
Length=2505574
Score = 84.2 bits (92), Expect = 4e-14
Identities = 111/150 (74%), Gaps = 3/150 (2%)
Strand=Plus/Plus
Query 19 AATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCT 78
|||| ||| ||||| |||||| | | ||| || ||| ||| | ||||||| || |
Sbjct 178947 AATTTAGA-TAATTAGTTTTTATAGTTATCTAACTAGGTAGTACTATAAAGCTACTATTT 179005
Query 79 GCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTC 138
|| ||| || ||| || |||||||||| |||||| ||||||||||| ||||| | | |
Sbjct 179006 ACTAGATAATAGCTAAATGCCTCTAAGTTAGAATCTATGCCAGAACGCGGTGA-TATTGC 179064
Query 139 CTGCACATCGTAGTCGGATACGAATAGGCT 168
|| |||| ||| |||| |||||||||
Sbjct 179065 CTATACAT-ATAGATAGATAAGAATAGGCT 179093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199150848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |