Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq30 239 4e-58 seq35 183 2e-41 >seq30 Length=762562 Score = 239 bits (264), Expect = 4e-58 Identities = 615/928 (66%), Gaps = 8/928 (1%) Strand=Plus/Plus Query 66001 GGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGAC 66060 ||| || || || ||||| |||||||| ||||| | ||| ||||| || ||||| | Sbjct 622089 GGGCAGAGCGAGGGATGCCAGGTTGCACACAGCAACCTCATCAGGGGCACAGTACTCAAT 622148 Query 66061 AATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCG 66120 ||| || ||||||| || || || ||||| |||| |||| || ||||||||||| Sbjct 622149 AATCTCAGTGCACAAGTTGGAGCTTCGAATGGTACCCAGGTTCTTCTGGTTACTCTTGCG 622208 Query 66121 ATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180 ||||| |||||||| | |||| | || |||| ||||| || | ||||| || Sbjct 622209 GTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCAAGAAT 622268 Query 66181 GGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGC-GTTCGTAAT 66239 || | ||| || | ||||| | || | | | |||| | | | ||||| | Sbjct 622269 AGCATACCAGAGCTTCTGAGCCTTGATGGT-CTTGCGACCCTTGCCAGCCTGCTCGTACT 622327 Query 66240 GTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTG 66299 || || || || || || || | |||| |||| || |||| | | Sbjct 622328 TCTCATACAGAGCCTCAAACTCATCGCCGTAGCAGTCGGCAAGACCGGGGCACTCATTAG 622387 Query 66300 GACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCC 66359 | ||||| || | ||| || || | || || ||||| ||| || ||||| || |||| Sbjct 622388 GGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGGATCC 622447 Query 66360 AGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGT 66419 |||| || ||| || ||||| || || |||||| ||||||| || ||||||| || Sbjct 622448 AGAGAGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAGGT 622507 Query 66420 CGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATAC 66479 | ||||||||||||| || | ||||| || || |||||||| ||||| | || | Sbjct 622508 CAAGGAACTCAAAGACATCCGAGTGCCAGGGCTCAAGGTAGATAGCGAAGGCACCAGGTC 622567 Query 66480 GTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTA 66539 | ||| |||||| ||||| || || || || ||||||||||| || | ||| || Sbjct 622568 GCTTGTTGCCACCCTGGTCAACATATCGGGCAGTGTTGTTGAAGACTCGGAGCATGGGGG 622627 Query 66540 CGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGT 66599 || ||||| || | || ||||| ||| ||||| ||| || || || || || Sbjct 622628 TGACGCCGTTGGAAGTACCGTTGGTACCGGCGATGTAGGAGCCGGTGGCACGGATGCGGT 622687 Query 66600 GAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGT 66657 | || ||||||||||| ||||| ||| |||| || || ||||| || | | | | Sbjct 622688 GCACGTTCAGACCAATGCCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGAGTAT 622747 Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717 | | || || |||||| ||| |||| ||| | ||| |||||||| || || Sbjct 622748 C--ATAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAGGAAGCATGAAGACAGCTG 622805 Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGA 66777 ||| | || ||| | || ||| || ||||| | ||||| || ||| | | || || Sbjct 622806 GGGCTGAGGAGTGCCAGCATTGAATAGAGTGGGGGAGGCGTGGGTGAAGAACTTGCTCGA 622865 Query 66778 CATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CAC 66836 |||| ||||| ||||| | |||| ||||| | || || || || | | ||| Sbjct 622866 CATGAGGTTGTATGTCTCAAGGACACGCTCAATATCGTCACCCCAGATGCCAACAGACAC 622925 Query 66837 ATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGG 66896 | ||||| | | || ||||| || ||||| | | | | || | | | ||| | Sbjct 622926 A-CGCATGATCATGTGCTGAGGGCGCTCGACAATCTTGTTATCAATCTTGAGGAGGTATG 622984 Query 66897 AGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | || ||||| ||||||| |||||||| Sbjct 622985 ATCGCTCCAGAGTCTTGAAGCCAAAGTA 623012 >seq35 Length=674057 Score = 183 bits (202), Expect = 2e-41 Identities = 563/858 (66%), Gaps = 26/858 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || ||||||||||| | |||||| | || || Sbjct 114604 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGATTGACCTG 114663 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 || || || | |||| ||| | || || | || || || || | Sbjct 114664 TCTAAGGATCTTCATGATTGGAACAACCGCCTAACTGCCGACGAGCAGTTCTTTGTCTCT 114723 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || |||||||| ||||| || || || ||||| ||||| | | || || Sbjct 114724 CACATCCTTGCCTTCTTTGCTGCTTCTGATGGCATTGTCAACGAGAACCTCGTTGAGCGG 114783 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| ||||| || | | ||||| || || ||||| || |||||||| ||| Sbjct 114784 TTCAGTGGCGAGGTCCAGATCCCTGAGGCCCGATGCTTCTATGGATTCCAGATCATGATG 114843 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 |||||| |||| || |||| ||| | || ||||| || ||||||| ||||| | Sbjct 114844 GAGAATATCCATTCTGAGACCTACTCGCTGCTTATCGACACTTACATCAAGGAGCCTTCT 114903 Query 61384 GAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAGC 61439 | || | | | | |||||||| |||||||| || || | || | || ||| || Sbjct 114904 CAGCGC-ACCTACCTCTTCAATGCTATCGAGACCATCCC--CTGT-ATCCGAAAGAAGGC 114959 Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTA--CATTTGGTGAACGATTGCTG 61497 ||||||||| || |||||| ||| |||| || | |||| | || || | Sbjct 114960 CGATTGGGCCATCCGATGGATC--CAGGACAAGAACTCTTCCTTTGCCCAGCGTCTGGTT 115017 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || || || | ||||||||| | || ||||| || | || || | ||||| ||| | Sbjct 115018 GCCTTCGCTGCTGTCGAGGGTATTTTCTTCAGCGGCGCCTTCGCTTCCATCTTCTGGCTC 115077 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| || || |||||||| |||||||| ||| || ||| | || || || |||||| Sbjct 115078 AAGAAGCGCGGTCTTATGCCTGGTCTGACTTTCTCTAACGAGCTCATCTCTCGTGACGAG 115137 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 || | || || |||||| ||| || | || | | || | |||| Sbjct 115138 GGTCTCCACACCGACTTTGCT----TGCC--TCCTCCACTCCCACCTCAAGGG-CCGTGC 115190 Query 61678 GAGGA-GCGTGTGGGTGAG---ATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCT 61733 || | || || | || || || ||| || || | ||||| ||||| || || Sbjct 115191 CAGCAAGCAGGTCATTCAGGACATCATTACTGATGCCGTGAACATCGAGCAGGAGTTCCT 115250 Query 61734 GACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATAT 61793 || || ||| |||| | || ||||||||||| | || ||| |||||| || Sbjct 115251 TACCGAGGCTCTGCCTTGTGCCCTGCTCGGCATGAATGCCGACCTCATGAAGCAGTACAT 115310 Query 61794 TGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853 ||| || ||||| ||||| || | |||| | | |||| || | ||||||| | Sbjct 115311 TGAGTTCGTTGCTGACCGACTACTCGTCGCTCTTGGTAACGAGAAGGTCTATAAGTCTTC 115370 Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 ||||| || || |||||||| | || || || | ||||||||| || || |||||||| Sbjct 115371 CAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAA 115430 Query 61914 ACGTGTAGGCGACTATCA 61931 ||||| || ||||| || Sbjct 115431 GCGTGTCGGTGACTACCA 115448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567481546480