Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31]
107 sequences; 53,748,257 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq30 239 4e-58
seq35 183 2e-41
>seq30
Length=762562
Score = 239 bits (264), Expect = 4e-58
Identities = 615/928 (66%), Gaps = 8/928 (1%)
Strand=Plus/Plus
Query 66001 GGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGAC 66060
||| || || || ||||| |||||||| ||||| | ||| ||||| || ||||| |
Sbjct 622089 GGGCAGAGCGAGGGATGCCAGGTTGCACACAGCAACCTCATCAGGGGCACAGTACTCAAT 622148
Query 66061 AATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCG 66120
||| || ||||||| || || || ||||| |||| |||| || |||||||||||
Sbjct 622149 AATCTCAGTGCACAAGTTGGAGCTTCGAATGGTACCCAGGTTCTTCTGGTTACTCTTGCG 622208
Query 66121 ATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180
||||| |||||||| | |||| | || |||| ||||| || | ||||| ||
Sbjct 622209 GTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCAAGAAT 622268
Query 66181 GGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGC-GTTCGTAAT 66239
|| | ||| || | ||||| | || | | | |||| | | | ||||| |
Sbjct 622269 AGCATACCAGAGCTTCTGAGCCTTGATGGT-CTTGCGACCCTTGCCAGCCTGCTCGTACT 622327
Query 66240 GTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTG 66299
|| || || || || || || | |||| |||| || |||| | |
Sbjct 622328 TCTCATACAGAGCCTCAAACTCATCGCCGTAGCAGTCGGCAAGACCGGGGCACTCATTAG 622387
Query 66300 GACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCC 66359
| ||||| || | ||| || || | || || ||||| ||| || ||||| || ||||
Sbjct 622388 GGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGGATCC 622447
Query 66360 AGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGT 66419
|||| || ||| || ||||| || || |||||| ||||||| || ||||||| ||
Sbjct 622448 AGAGAGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAGGT 622507
Query 66420 CGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATAC 66479
| ||||||||||||| || | ||||| || || |||||||| ||||| | || |
Sbjct 622508 CAAGGAACTCAAAGACATCCGAGTGCCAGGGCTCAAGGTAGATAGCGAAGGCACCAGGTC 622567
Query 66480 GTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTA 66539
| ||| |||||| ||||| || || || || ||||||||||| || | ||| ||
Sbjct 622568 GCTTGTTGCCACCCTGGTCAACATATCGGGCAGTGTTGTTGAAGACTCGGAGCATGGGGG 622627
Query 66540 CGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGT 66599
|| ||||| || | || ||||| ||| ||||| ||| || || || || ||
Sbjct 622628 TGACGCCGTTGGAAGTACCGTTGGTACCGGCGATGTAGGAGCCGGTGGCACGGATGCGGT 622687
Query 66600 GAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGT 66657
| || ||||||||||| ||||| ||| |||| || || ||||| || | | | |
Sbjct 622688 GCACGTTCAGACCAATGCCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGAGTAT 622747
Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717
| | || || |||||| ||| |||| ||| | ||| |||||||| || ||
Sbjct 622748 C--ATAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAGGAAGCATGAAGACAGCTG 622805
Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGA 66777
||| | || ||| | || ||| || ||||| | ||||| || ||| | | || ||
Sbjct 622806 GGGCTGAGGAGTGCCAGCATTGAATAGAGTGGGGGAGGCGTGGGTGAAGAACTTGCTCGA 622865
Query 66778 CATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CAC 66836
|||| ||||| ||||| | |||| ||||| | || || || || | | |||
Sbjct 622866 CATGAGGTTGTATGTCTCAAGGACACGCTCAATATCGTCACCCCAGATGCCAACAGACAC 622925
Query 66837 ATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGG 66896
| ||||| | | || ||||| || ||||| | | | | || | | | ||| |
Sbjct 622926 A-CGCATGATCATGTGCTGAGGGCGCTCGACAATCTTGTTATCAATCTTGAGGAGGTATG 622984
Query 66897 AGCGTTCCAGGGTCTTGATACCAAAGTA 66924
| || ||||| ||||||| ||||||||
Sbjct 622985 ATCGCTCCAGAGTCTTGAAGCCAAAGTA 623012
>seq35
Length=674057
Score = 183 bits (202), Expect = 2e-41
Identities = 563/858 (66%), Gaps = 26/858 (3%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || ||||||||||| | |||||| | || ||
Sbjct 114604 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGATTGACCTG 114663
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203
|| || || | |||| ||| | || || | || || || || |
Sbjct 114664 TCTAAGGATCTTCATGATTGGAACAACCGCCTAACTGCCGACGAGCAGTTCTTTGTCTCT 114723
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|| | | || |||||||| ||||| || || || ||||| ||||| | | || ||
Sbjct 114724 CACATCCTTGCCTTCTTTGCTGCTTCTGATGGCATTGTCAACGAGAACCTCGTTGAGCGG 114783
Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323
||| ||||| || | | ||||| || || ||||| || |||||||| |||
Sbjct 114784 TTCAGTGGCGAGGTCCAGATCCCTGAGGCCCGATGCTTCTATGGATTCCAGATCATGATG 114843
Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383
|||||| |||| || |||| ||| | || ||||| || ||||||| ||||| |
Sbjct 114844 GAGAATATCCATTCTGAGACCTACTCGCTGCTTATCGACACTTACATCAAGGAGCCTTCT 114903
Query 61384 GAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAGC 61439
| || | | | | |||||||| |||||||| || || | || | || ||| ||
Sbjct 114904 CAGCGC-ACCTACCTCTTCAATGCTATCGAGACCATCCC--CTGT-ATCCGAAAGAAGGC 114959
Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTA--CATTTGGTGAACGATTGCTG 61497
||||||||| || |||||| ||| |||| || | |||| | || || |
Sbjct 114960 CGATTGGGCCATCCGATGGATC--CAGGACAAGAACTCTTCCTTTGCCCAGCGTCTGGTT 115017
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| || || | ||||||||| | || ||||| || | || || | ||||| ||| |
Sbjct 115018 GCCTTCGCTGCTGTCGAGGGTATTTTCTTCAGCGGCGCCTTCGCTTCCATCTTCTGGCTC 115077
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| || || |||||||| |||||||| ||| || ||| | || || || ||||||
Sbjct 115078 AAGAAGCGCGGTCTTATGCCTGGTCTGACTTTCTCTAACGAGCTCATCTCTCGTGACGAG 115137
Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677
|| | || || |||||| ||| || | || | | || | ||||
Sbjct 115138 GGTCTCCACACCGACTTTGCT----TGCC--TCCTCCACTCCCACCTCAAGGG-CCGTGC 115190
Query 61678 GAGGA-GCGTGTGGGTGAG---ATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCT 61733
|| | || || | || || || ||| || || | ||||| ||||| || ||
Sbjct 115191 CAGCAAGCAGGTCATTCAGGACATCATTACTGATGCCGTGAACATCGAGCAGGAGTTCCT 115250
Query 61734 GACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATAT 61793
|| || ||| |||| | || ||||||||||| | || ||| |||||| ||
Sbjct 115251 TACCGAGGCTCTGCCTTGTGCCCTGCTCGGCATGAATGCCGACCTCATGAAGCAGTACAT 115310
Query 61794 TGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853
||| || ||||| ||||| || | |||| | | |||| || | ||||||| |
Sbjct 115311 TGAGTTCGTTGCTGACCGACTACTCGTCGCTCTTGGTAACGAGAAGGTCTATAAGTCTTC 115370
Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913
||||| || || |||||||| | || || || | ||||||||| || || ||||||||
Sbjct 115371 CAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAA 115430
Query 61914 ACGTGTAGGCGACTATCA 61931
||||| || ||||| ||
Sbjct 115431 GCGTGTCGGTGACTACCA 115448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567481546480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |