Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS1030_20[genbank_20GCA_5F000966855.1_202015-03-31] 107 sequences; 53,748,257 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq87 102 3e-16 seq97 98.7 4e-15 >seq87 Length=1518211 Score = 102 bits (112), Expect = 3e-16 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 21706 CTGGGGTCGAGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAA 21765 ||||||| ||||||| ||||| | || ||||||||||| ||||| | |||||| || | Sbjct 561200 CTGGGGTATAGATGCGCTCCAGCACAAGCTGGGCGATGCGGTCGCCCTCCTTGATCTCGA 561259 Query 21766 AGTCCTGGTCAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGA 21825 | ||| ||| | ||||||||| |||| ||| ||| | ||||| || |||| Sbjct 561260 AATCCGAGTCGGCGTGGTTGAACAGCAGGACCTTGACTTGGCCCCGGTAGTCGGCATCGA 561319 Query 21826 CGACCCCGGCGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGC 21885 ||| || ||||| ||||| || ||| | || || || |||| |||||||| || Sbjct 561320 TGACACCAGCGCCCGTGTCGATGAAGTGCTTGGACGCAAGTCCAGATCGGGGAGCGATGC 561379 Query 21886 GGCCGT 21891 |||||| Sbjct 561380 GGCCGT 561385 >seq97 Length=1508482 Score = 98.7 bits (108), Expect = 4e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 349079 AGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAG 349138 |||||||||||||||| ||||| |||||||| |||||||| | || || || |||||| Sbjct 166369 AGAATCTCCTTGAGTCGGGGCACACCCAGGGTAACGTTCTTCGACGACACACCAGCAAAG 166428 Query 349139 TGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATG 349198 |||||||| | || |||| ||| ||| ||||| || ||| |||| |||| | | Sbjct 166429 TGGAAGGTGTTCAGCGTCATCTGGGTGGCAGGCTCTCCAATGGACTGCGCCGCCAAAACA 166488 Query 349199 CCTACCATCTCGCCGGG 349215 || ||||| || || || Sbjct 166489 CCAACCATTTCACCAGG 166505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084736272244386