Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq55 114 2e-23 seq21 107 3e-21 seq12 105 1e-20 >seq55 Length=1684425 Score = 114 bits (126), Expect = 2e-23 Identities = 100/123 (81%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 58 TTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAG 116 |||||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||| Sbjct 658618 TTCCTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAG 658677 Query 117 ATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176 ||||||| ||||| ||||||||| | | ||||| || | |||||||||||||||| Sbjct 658678 ATTACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGT 658737 Query 177 GCG 179 || Sbjct 658738 ACG 658740 >seq21 Length=326613 Score = 107 bits (118), Expect = 3e-21 Identities = 62/64 (97%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 165 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAAC 224 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 132127 TGTAACGCGCGTGCGGCCCAGAACATCTAAGGTCATCACAGACCTGTTATTGCCTCAAAC 132186 Query 225 TTCC 228 |||| Sbjct 132187 TTCC 132190 >seq12 Length=4630793 Score = 105 bits (116), Expect = 1e-20 Identities = 90/110 (82%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 114 AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCG 173 || ||||||| ||||| | || ||| ||| ||||| || | | |||||||| |||| Sbjct 3671919 AATATTACCCAGACCTTTTGGACAA--TGAAGTACTCGCTGGCTCCGTCAGTGTAACGCG 3671976 Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 223 ||| |||||||||||||||||||||||| |||||||||| ||||||| || Sbjct 3671977 CGTACGGCCCAGAACATCTAAGGGCATCGCAGACCTGTTGTTGCCTCCAA 3672026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999541045