Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31]
63 sequences; 42,866,936 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq55 114 2e-23
seq21 107 3e-21
seq12 105 1e-20
>seq55
Length=1684425
Score = 114 bits (126), Expect = 2e-23
Identities = 100/123 (81%), Gaps = 1/123 (1%)
Strand=Plus/Plus
Query 58 TTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAG 116
|||||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||
Sbjct 658618 TTCCTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAG 658677
Query 117 ATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176
||||||| ||||| ||||||||| | | ||||| || | ||||||||||||||||
Sbjct 658678 ATTACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGT 658737
Query 177 GCG 179
||
Sbjct 658738 ACG 658740
>seq21
Length=326613
Score = 107 bits (118), Expect = 3e-21
Identities = 62/64 (97%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 165 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAAC 224
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 132127 TGTAACGCGCGTGCGGCCCAGAACATCTAAGGTCATCACAGACCTGTTATTGCCTCAAAC 132186
Query 225 TTCC 228
||||
Sbjct 132187 TTCC 132190
>seq12
Length=4630793
Score = 105 bits (116), Expect = 1e-20
Identities = 90/110 (82%), Gaps = 2/110 (2%)
Strand=Plus/Plus
Query 114 AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCG 173
|| ||||||| ||||| | || ||| ||| ||||| || | | |||||||| ||||
Sbjct 3671919 AATATTACCCAGACCTTTTGGACAA--TGAAGTACTCGCTGGCTCCGTCAGTGTAACGCG 3671976
Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 223
||| |||||||||||||||||||||||| |||||||||| ||||||| ||
Sbjct 3671977 CGTACGGCCCAGAACATCTAAGGGCATCGCAGACCTGTTGTTGCCTCCAA 3672026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751999541045
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |