Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq21 141 1e-31 seq12 114 2e-23 >seq21 Length=326613 Score = 141 bits (156), Expect = 1e-31 Identities = 92/100 (92%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 20 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAAC 79 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 132127 TGTAACGCGCGTGCGGCCCAGAACATCTAAGGTCATCACAGACCTGTTATTGCCTCAAAC 132186 Query 80 TTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 |||||| |||| | |||| ||||||||| |||||||| || Sbjct 132187 TTCCATCGGCTTG-AGCCGATAGTCCCTTTAAGAAGCTAG 132225 >seq12 Length=4630793 Score = 114 bits (126), Expect = 2e-23 Identities = 72/78 (92%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct 3671949 TACTCGCTGGCTCCGTCAGTGTAACGCGCGTACGGCCCAGAACATCTAAGGGCATCGCAG 3672008 Query 61 ACCTGTTATTGCCTCAAA 78 ||||||| ||||||| || Sbjct 3672009 ACCTGTTGTTGCCTCCAA 3672026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799513703