Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31]
63 sequences; 42,866,936 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq54 239 5e-61
>seq54
Length=1180
Score = 239 bits (264), Expect = 5e-61
Identities = 167/189 (88%), Gaps = 1/189 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| ||||||
Sbjct 405 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATA 346
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||
Sbjct 345 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 287
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||| ||||| | |||||||| ||| | |||||||||||
Sbjct 286 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 227
Query 181 TTGGATTTA 189
|||||||||
Sbjct 226 TTGGATTTA 218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511999687520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |