Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq55 192 1e-46 seq21 159 7e-37 seq12 145 1e-32 >seq55 Length=1684425 Score = 192 bits (212), Expect = 1e-46 Identities = 117/124 (94%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 152 CGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGT 211 || |||||||||||||||||||||||| |||||| | ||||||||||||||||||||| Sbjct 658740 CGTACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTTTCCTTGGCCGGAAGGTCTGGGT 658681 Query 212 AATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAG 271 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 658680 AATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAG 658621 Query 272 GAAT 275 |||| Sbjct 658620 GAAT 658617 >seq21 Length=326613 Score = 159 bits (176), Expect = 7e-37 Identities = 93/96 (97%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 132222 GCTTCTTAAAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 132163 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACA 166 ||| ||||||||||||||||||||||||||| |||| Sbjct 132162 ATGACCTTAGATGTTCTGGGCCGCACGCGCGTTACA 132127 >seq12 Length=4630793 Score = 145 bits (160), Expect = 1e-32 Identities = 104/119 (87%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 108 TTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACAC 167 || ||||||| |||||||||| |||||||||||||||||||||||| ||||||| ||||| Sbjct 3672026 TTGGAGGCAACAACAGGTCTGCGATGCCCTTAGATGTTCTGGGCCGTACGCGCGTTACAC 3671967 Query 168 TGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTC 226 |||| |||||| ||||| | ||| ||| || |||||||||||||| ||||||||||| Sbjct 3671966 TGACGGAGCCAGCGAGTACTTCA--TTGTCCAAAAGGTCTGGGTAATATTGTTAAACTC 3671910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199403264