Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31]
63 sequences; 42,866,936 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq55 192 1e-46
seq21 159 7e-37
seq12 145 1e-32
>seq55
Length=1684425
Score = 192 bits (212), Expect = 1e-46
Identities = 117/124 (94%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 152 CGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGT 211
|| |||||||||||||||||||||||| |||||| | |||||||||||||||||||||
Sbjct 658740 CGTACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTTTCCTTGGCCGGAAGGTCTGGGT 658681
Query 212 AATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAG 271
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658680 AATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAG 658621
Query 272 GAAT 275
||||
Sbjct 658620 GAAT 658617
>seq21
Length=326613
Score = 159 bits (176), Expect = 7e-37
Identities = 93/96 (97%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 71 GCTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 132222 GCTTCTTAAAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 132163
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACA 166
||| ||||||||||||||||||||||||||| ||||
Sbjct 132162 ATGACCTTAGATGTTCTGGGCCGCACGCGCGTTACA 132127
>seq12
Length=4630793
Score = 145 bits (160), Expect = 1e-32
Identities = 104/119 (87%), Gaps = 2/119 (2%)
Strand=Plus/Minus
Query 108 TTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACAC 167
|| ||||||| |||||||||| |||||||||||||||||||||||| ||||||| |||||
Sbjct 3672026 TTGGAGGCAACAACAGGTCTGCGATGCCCTTAGATGTTCTGGGCCGTACGCGCGTTACAC 3671967
Query 168 TGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTC 226
|||| |||||| ||||| | ||| ||| || |||||||||||||| |||||||||||
Sbjct 3671966 TGACGGAGCCAGCGAGTACTTCA--TTGTCCAAAAGGTCTGGGTAATATTGTTAAACTC 3671910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947199403264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |