Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq54 470 4e-130 seq21 78.8 3e-12 >seq54 Length=1180 Score = 470 bits (520), Expect = 4e-130 Identities = 325/366 (89%), Gaps = 18/366 (5%) Strand=Plus/Plus Query 112 GTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAT 171 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 829 GTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAA 888 Query 172 ACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA 231 ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 889 ACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCA 948 Query 232 TCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACC-AAGGAGCCCCGAA 290 |||||||| ||||||||||||||||| |||||||||||||||||| ||||||| |||| Sbjct 949 TCGCCGGCACAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAAAGGAGCGGCGAA 1008 Query 291 GGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATG 348 |||||||||||||||||||||||||||||||| || |||||||||| || | ||||| Sbjct 1009 CCGCGTTGGTTTTTTATCTAATAAATACACCCCTCCCAGAAGTCGGGGCTTGATTGCATG 1068 Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAA 408 ||||||||||| |||||||||| ||||||| ||||||||||| |||| Sbjct 1069 TATTAGCTCTA--------------ATCCATGTAGCAAGGTACCATCAAATAAACTATAA 1114 Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCAT 467 ||||||||||||||||||||||||||||| ||| | | ||| |||||||||||||||||| Sbjct 1115 CTGATTTAATGAGCCATTCGCAGTTTCACAGTACAAACTTGTTTATACTTAGACATGCAT 1174 Query 468 GGCTTA 473 |||||| Sbjct 1175 GGCTTA 1180 >seq21 Length=326613 Score = 78.8 bits (86), Expect = 3e-12 Identities = 61/73 (84%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 253 ATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAAT 312 ||||| |||||| ||||| |||| | ||||||||||| ||||||||| ||||||| Sbjct 255973 ATTCGAGGAGTTATCATGAAATACCAGTAAACCCCGAAGGGCATTGGTTTTTAATCTAAT 255914 Query 313 AAATACACCCCTT 325 ||||||||||||| Sbjct 255913 AAATACACCCCTT 255901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399048448