Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq44 329 3e-85 seq61 196 4e-45 >seq44 Length=2799272 Score = 329 bits (364), Expect = 3e-85 Identities = 1210/1878 (64%), Gaps = 48/1878 (3%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||||||||| | | || || |||| || | ||| ||||||||||| || Sbjct 2094235 ATCGACGGTGAACTGGATAGGAGCGGCGGCAGCCTGTGTGCGAAGGTAGTACATGCCAGT 2094294 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||| ||| ||| || ||| ||||| | || | || |||| | | || | Sbjct 2094295 CTTGAGACCAAGCTTCCAGCCAGCGAAGTGCAT-GCTGGTGATCTTGCCCATCGTGGGAT 2094353 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || || | || || |||||||||| | ||| || || ||||||| Sbjct 2094354 CCTTCATGTGAATGTTGAGGGATTGGGACTGATCGATGAATGCACCTCGGTCGGCAGCCA 2094413 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GC---GACGTACC 65311 | | | | | || || |||||||| || |||||||| || || ||||| | Sbjct 2094414 TCTGGACAACCTGGCGCTGAGAAATCTCCCAAACAGTCTTGTAAAGAGCCTTGACGT-CG 2094472 Query 65312 TCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGC 65371 || || || | |||| ||| | ||||| | | |||||| || || | Sbjct 2094473 GCA---GGGATATTGGGGATGTTCTGAATAGAACCGTTATCGGAAATAATACGGTTCTTC 2094529 Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACT 65431 || | || |||||||| |||| |||| ||||| || | ||| | |||| || Sbjct 2094530 ATGGCATCAGACCACAAGCCCATGTCGACAAGATCTTTGAGCAACCAGGGGTTGACAACC 2094589 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||||| || | || || || || || |||||||| ||| || || ||| | Sbjct 2094590 TGGAACTCACCAGCAAGGACTCGGCGCTGGTAAATGTTGGAGGTGTAAGGCTCGAAGCAC 2094649 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || |||| || ||||| || | |||| ||||| ||||| || |||| | || | Sbjct 2094650 TCGTTGTTACCCAGAATCTGCGAAGTACTGGCAGTAGGCATAGGGGCGAGGAGCAGACTG 2094709 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACATCGGTTT 65610 || || | |||| | | || | | || | | || ||||||| ||| | ||| Sbjct 2094710 TTACGGATACCGTGAGTCTTAACATCCTCTCGAAGACTC-TCCCAGTCCCAAA--GGTCG 2094766 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 | | | ||| |||||| || || || | || | ||| || ||||| Sbjct 2094767 GAAGGC----TTGACGTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAACC 2094822 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730 ||| || ||| |||||||||||||| | || | || ||| || || Sbjct 2094823 CTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGCCAACTGCACGGAGGCAGTGAGGGCAGC 2094882 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGG 65790 || |||||||| || || | || || || | ||||| ||| | || Sbjct 2094883 GTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCTCTAGCCTCGGGAGACTCAAAGGG 2094942 Query 65791 CATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 ||| | || | |||| || || ||||| || || |||| |||||| || || || Sbjct 2094943 CATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAAGACCGATAGGTCGGTG 2095002 Query 65851 ACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATT 65910 ||||| ||| | ||||| |||||||||||| ||||| |||||| || || Sbjct 2095003 ACGCATGTTGCTGTTGCGAGCCTCTTGTACAGGGTAGTGATTGACATCGATGATCTTGTT 2095062 Query 65911 CAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGG 65970 ||| ||||| || || || || | ||| | | ||| ||| ||| Sbjct 2095063 CAAGTTGCGGACGACAACCTGACTGACCTGATGCAGCTTCTTGAAGTCA-------TAGC 2095115 Query 65971 ACG----ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGC 66026 | | |||| ||| || | || || |||||||| || || ||||||| Sbjct 2095116 AAGCCTCATCGT-AGTTGATGAAAGCA--------GGCAGGGCAAGGGAGGCAAGGTTGC 2095166 Query 66027 AGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGC 66086 | ||||| | ||| ||||| || ||||||| || || |||||||||||| || | Sbjct 2095167 AAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGATTAGAGCTTC 2095226 Query 66087 GTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGT 66146 | ||||| || | |||| || || |||||||| || || ||||||||||| | |||| Sbjct 2095227 GGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAAAGCATGA 2095286 Query 66147 ACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCA 66206 | || | |||||||| |||| ||||| |||||| | |||||| | ||||| | Sbjct 2095287 AGGGGTTTCCGGTCTCGGTCTGGGCCTCAAGGATGGCATACCAAAGCTTCTGAGCCTTGA 2095346 Query 66207 CCGTACGTACCGCCCT-ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCA 66265 | || | | |||| ||||| | ||||| | ||||||||| || || |||| Sbjct 2095347 TGG-ACTTGCGACCCTTACCTTCCCTCTCGTACTTCTCGTAGAGGGCCTCAAACTCTTCA 2095405 Query 66266 CCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCC 66325 || | |||| |||| || |||| || || ||||| || | ||| || || | | Sbjct 2095406 CCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGCACATAAGGGTCCACTCTCCGTTC 2095465 Query 66326 TGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCT 66385 | || ||||| ||| || |||||||| ||||||||||| ||| || ||||| || Sbjct 2095466 TTCTCAACACGCTTCATGAAAAGATCAGGGATCCAGAGGGCCAGGAACAGGTCGCGGGCG 2095525 Query 66386 CGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGC 66445 || |||||| | ||||| || || || | || |||||||| |||| || || ||| Sbjct 2095526 CGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACATCAGCGTGC 2095585 Query 66446 CATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAG 66505 || || || ||||||||||| || | || || ||| ||||| || || |||||| Sbjct 2095586 CAAGGCTCTAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTACCACCCTGATCAACGTAG 2095645 Query 66506 CGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTG 66565 || || |||||||||||||| | ||| || || | ||||| ||| | || ||||| Sbjct 2095646 CGGGCAGTGTTGTTGAAGACACGTAGCATAGGAACAACACCGTTGGATGTACCGTTGGTA 2095705 Query 66566 CCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCC 66625 || | ||| ||| || || || || ||| |||| |||||||||||||| ||| Sbjct 2095706 CCAGCAATGTAGGAGCCAGTGGCACGGATTCGGTGGGCATTGAGACCAATACCACCAGCC 2095765 Query 66626 GTCTTCGAGATGGCAGCACAATCGGCC---ACTGTCCGGAATATGCCGTCAATGGAGTCA 66682 |||| || || ||||| || | | || | || ||||||||| ||| Sbjct 2095766 ATCTTGGAAATCATGGCACA---GGTCTTGAGGGTATCATAGATACCGTCAATGCTGTCC 2095822 Query 66683 CCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAG 66742 |||| ||| | | | ||||||| ||| ||||||| || || | || |||| Sbjct 2095823 TCCTTCATGTCAACCAAGAAGCATGAGGAAAGCTGGGGTTGAGGGGTACCAGCATTGAAG 2095882 Query 66743 AGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACA 66802 |||||||| | ||| || || ||| | | || ||||| || || ||||| | |||| Sbjct 2095883 AGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGACATAAGGTTATATGTCTCCACGACA 2095942 Query 66803 GCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCG 66861 ||||| | || || || || | | |||| ||||| | | || ||||| || Sbjct 2095943 CGCTCAATATCATCACCCCAGATGCCAATAGACACA-CGCATGATCATGTGCTGAGGACG 2096001 Query 66862 TTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAA 66921 ||||| | | | | || | | | ||| || || |||| ||||||| ||||| Sbjct 2096002 CTCGACAATCTTGCCGTCAATCTTGAGGAGGTATGATCGCTCCAATGTCTTGAAGCCAAA 2096061 Query 66922 GTACGAGTAATTGAAATC 66939 ||| ||| | |||||| Sbjct 2096062 GTATTGGTATTGGAAATC 2096079 >seq61 Length=1579179 Score = 196 bits (216), Expect = 4e-45 Identities = 567/858 (66%), Gaps = 26/858 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || |||||||||||||| | |||||| | ||| | Sbjct 1457135 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCCGAGGAGATTGATCTC 1457076 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| ||| | | |||||| | ||| | | | | ||| || ||||| Sbjct 1457075 TCCAAGGACCTCCACGACTGGAACAACCGTCTGACCACTGATGAGCAGTTCTTCATCTCT 1457016 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || || || || ||||| |||||| | | || || Sbjct 1457015 CACATCCTTGCCTTCTTCGCTGCGTCCGATGGCATTGTCAACGAGAATCTCGTTGAGCGA 1456956 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | ||||| || || |||||||| ||||| || || Sbjct 1456955 TTCA-GCGGCGAGGTCCAGATCCCTGAGGCTCGATGCTTCTACGGATTCCAAATCATGAT 1456897 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| | |||||||||| || | ||||| || || ||||||| |||| || Sbjct 1456896 GGAGAACATTCACTCGGAGACCTATTCCCTGCTCATTGACACCTACATCAAAGAGCCCGC 1456837 Query 61383 GGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG--- 61438 | || | | | | ||||| || | || || || || || | | ||||| Sbjct 1456836 CCAGCGA-ACCTACCTCTTCAACGCTGTTGATACCATTCCC----TGCATCCGAAAGAAG 1456782 Query 61439 -CGGATTGGGCC-TTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTG 61494 | || |||||| ||| || ||||| ||| |||| | || || |||| | || || Sbjct 1456781 GCTGACTGGGCCATTCGAT-GGATC--CAGGACAAGGACTCTACCTTTGCCCAGCGTCTG 1456725 Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554 | || || || | ||||||||| | || |||||||| | |||||| | ||||| ||| Sbjct 1456724 GTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGTGGTGCCTTTGCCTCCATCTTCTGG 1456665 Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGAC 61614 | ||||| ||||| || |||||||||||||||||| ||| ||| | || || || || Sbjct 1456664 CTCAAGAAGCGTGGCCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGAT 1456605 Query 61615 GAGGGCATGCATTGTGATTTTG-CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC 61673 ||||| | || || || | ||| | | |||| | | | || | ||| | Sbjct 1456604 GAGGGTCTTCACACCGACTTCGCCTGCCT---TCTTCACTC-CCACCTCAAGGGCCGTGC 1456549 Query 61674 GTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCT 61733 || || | || || || |||| || || || || || ||||| || || Sbjct 1456548 TAGCAAGCAGATGATCCAGGACATCATTTGTGATGCCGTCACCATTGAGCAGGAGTTCCT 1456489 Query 61734 GACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATAT 61793 ||||| || | ||| | || | |||||||| | || ||| |||||| || Sbjct 1456488 CACTGAGGCCCTCCCCTGTGCCCTGCTTGGCATGAACTCCAATCTCATGAAGCAGTACAT 1456429 Query 61794 TGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853 ||| ||||| || ||||||||| | |||| | || | || | |||| || | | Sbjct 1456428 TGAGTTTGTCGCTGACCGTCTGCTCGTCGCACTCGGCAACGAGAAGGTCTACAAGGCCAC 1456369 Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 ||||| || || |||||||| | || || || | ||||||||| || || |||||||| Sbjct 1456368 CAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAACTTCTTCGAGAA 1456309 Query 61914 ACGTGTAGGCGACTATCA 61931 ||||| | ||||| || Sbjct 1456308 GCGTGTCGCTGACTACCA 1456291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567694742320