Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016- 06-02] 2,401 sequences; 41,308,709 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1076 363 1e-95 seq179 210 2e-49 >seq1076 Length=4255 Score = 363 bits (402), Expect = 1e-95 Identities = 1224/1878 (65%), Gaps = 46/1878 (2%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| || | | |||||| |||| || | ||| |||||||||||||| Sbjct 3011 ATCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGT 2952 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||||||| ||| || | ||| ||||| || | || |||| | | || Sbjct 2951 CTTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATAC-TGGTGATCTTGCCCATCGTGGGG 2894 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || |||| ||||| |||||| ||| | ||| ||||| |||||| Sbjct 2893 TCCTTCATGTGAATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCC 2834 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | || || | || || ||||||||||| ||||||||||| | | | || || Sbjct 2833 ATCTGAACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGA-GCCTTGACATC 2775 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 || || | ||||| ||| | |||||| ||||| ||||| || ||| Sbjct 2774 GGCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCAT 2715 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431 | || ||||||| ||||| |||| ||| | |||| | || | | |||| || Sbjct 2714 AGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC--AGCCAGGGGTTGACAACC 2657 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||||| || | || ||||| || ||||| ||||| ||| ||| || ||| | Sbjct 2656 TGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCAC 2597 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| | ||| |||| ||| ||||| ||||| ||||||| | || | Sbjct 2596 TCGTTGTTGCCCAAAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCGAGGAGCAGACTG 2537 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACATCGGTTT 65610 || || | |||| | | | | | || | | || ||||||| ||| | | | Sbjct 2536 TTACGGATGCCGTGTGTCTTGACTTCCTCTCGAAGAGTC-TCCCAGTCCCAGA---GGTC 2481 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 | | | | | ||| |||||| || || ||| | || | ||| || ||||| Sbjct 2480 AGAG--GGCTTG-ACGTTCCACATGTCAAACTGGAGGATACCCTCAGAGGCGGGGGAACC 2424 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730 ||| | ||| ||||||||||| || || || | || ||| || || Sbjct 2423 CTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAGGCAGTGAGGGCAGC 2364 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGG 65790 ||| |||||||| || || | || || ||||| ||||| |||| | || Sbjct 2363 GTGATAGATGGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGG 2304 Query 65791 CATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 ||||| || | |||| || || || || ||||| |||| ||| ||||| || || Sbjct 2303 CATACGCAGAGCAAGGAAAGCATCAGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTG 2244 Query 65851 ACGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 |||| || | || || |||| | |||||||||| || | |||||| || Sbjct 2243 GCGCATGTT--ACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTG 2186 Query 65909 TTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAA--ATGTT 65966 |||| ||||| | || || || || |||| | | ||| || | | | | Sbjct 2185 TTCAGGTTGCGAATAACAACCTGACTGACCTTATGCAACTTCTTGAAGTCGTAGCAAGCT 2126 Query 65967 TAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGC 66026 | |||| || | || ||| || | ||||| || ||||||| Sbjct 2125 TC-----ATCGTAGTTGATG---------AAGGAGGGCAGAGACAGAGAGGCAAGGTTGC 2080 Query 66027 AGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGC 66086 ||||||| | ||||||||| || ||||||| |||||| ||||| || || || | Sbjct 2079 AGACAGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTC 2020 Query 66087 GTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGT 66146 | ||||| || | |||| ||| || |||||||| ||||| ||||||||||| | |||| Sbjct 2019 GGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGA 1960 Query 66147 ACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCA 66206 | || | ||||||||| |||| ||||| ||||||| |||||| | ||||| | Sbjct 1959 ATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGA 1900 Query 66207 CCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCA 66265 || | | | |||| | | | | ||||| | |||||| || ||||| || Sbjct 1899 TGGT-CTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCT 1841 Query 66266 CCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCC 66325 || | |||| || | || |||| || || |||||||| | ||| ||||| | | Sbjct 1840 CCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTC 1781 Query 66326 TGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCT 66385 | ||| ||||| ||| || |||||||| ||||| ||||| ||| ||||| || || Sbjct 1780 TTTTCAACACGTTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCA 1721 Query 66386 CGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGC 66445 || |||||| | ||||| || || || | || ||||| || |||| || | ||| Sbjct 1720 CGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAAATCGAAGACATCAGAGTGC 1661 Query 66446 CATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAG 66505 || || || ||||||||||| || | || || ||| |||||| |||||||| || Sbjct 1660 CAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATAC 1601 Query 66506 CGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTG 66565 ||||| |||||||||||||| | ||| || || | || || ||| | || ||||| Sbjct 1600 CGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAATACCATTCGATGTACCGTTGGTA 1541 Query 66566 CCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCC 66625 ||| ||||| || || || || ||| ||| ||||| |||||||||||||| ||| Sbjct 1540 CCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCC 1481 Query 66626 GTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCAC 66683 |||| ||||| ||||| || | | | || | | || || ||||| ||| Sbjct 1480 ATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC--GTAGATTCCCTCAATACTGTCGT 1423 Query 66684 CCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGA 66743 |||| || | | | |||| || | |||||| | || ||| |||| ||||| Sbjct 1422 CCTTCATATCAACCAAGAAGCAAGATGATAATTGGGGCTGAGGAGTGCCGGCATTGAAGA 1363 Query 66744 GGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAG 66803 | ||||| | ||| ||||| ||| | | || |||||| |||||| ||||| | ||| Sbjct 1362 GCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTC 1303 Query 66804 CATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGT 66862 || || | || || || || | | |||| ||||| | | || ||||| || Sbjct 1302 GCTCGATATCATCACCCCAGATACCAACAGACACA-CGCATGATCATGTGCTGAGGGCGC 1244 Query 66863 TCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAG 66922 ||||| | | | | | || | | | ||| || || |||| ||||||| |||||| Sbjct 1243 TCGACAATCTTACCGTCAATTTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAG 1184 Query 66923 TACGAGTAATTGAAATCG 66940 || ||| | ||||||| Sbjct 1183 TATTGGTATTGGAAATCG 1166 >seq179 Length=39909 Score = 210 bits (232), Expect = 2e-49 Identities = 567/857 (66%), Gaps = 24/857 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || |||||||||||||| | |||||| | ||| | Sbjct 36007 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 35948 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || | | | ||| || ||| | Sbjct 35947 TCCAAGGATCTTCACGACTGGAACAACCGCCTGACTGCTGATGAGCAGTTCTTCGTCTCT 35888 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || || ||||||||||| ||||| | | || || Sbjct 35887 CACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAGCGA 35828 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| ||||| || | | ||||| ||||| ||||||||||||||||| ||| Sbjct 35827 TTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATG 35768 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| | ||||| |||| ||| | |||||||| || ||||||| ||||| || Sbjct 35767 GAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGAGCCCGCC 35708 Query 61384 GAACGTGAAC-GAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA---- 61437 | | |||| || | ||||| ||||| ||||| || || || | | |||| Sbjct 35707 CA--GCGAACATATCTCTTCAACGCCATTGAGACCATTCC----CTGCATCCGAAAGAAG 35654 Query 61438 GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGC 61495 || || |||||| || ||||| |||| | || | || | |||| | || | Sbjct 35653 GCTGACTGGGCCATCCGATGGAT--CCAGGATAAGGACTCCTCCTTTGCCCAGCGTCTCG 35596 Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 | || ||||| | || |||||| | || |||||||| | || ||| | ||||| ||| Sbjct 35595 TTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGCGCCTTCGCCTCTATCTTCTGGC 35536 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 | ||||| ||||| || ||||| |||||||||||| ||| ||| | || || || |||| Sbjct 35535 TCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACG 35476 Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCCG 61674 |||| | || ||| ||||| | || || || || | || | |||| | Sbjct 35475 AGGGTCTTCACACTGACTTTGC---CTGCCTCCTC-CACTCTCACCTCAAGGGTCGTGCC 35420 Query 61675 TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTG 61734 || || | || || | ||| || || || || || ||||| || || Sbjct 35419 AGTAAGCAGATGATCCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCCTC 35360 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 || || ||| | ||| | ||| |||||||||| | || || ||| |||||| ||| Sbjct 35359 ACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTACATT 35300 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 || || || || || ||||| | |||| | | || | || | |||| || | | Sbjct 35299 GAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCACC 35240 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 ||||| || || |||||||| | || || || | |||||||| || || |||||||| Sbjct 35239 AACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAG 35180 Query 61915 CGTGTAGGCGACTATCA 61931 ||||| | ||||| || Sbjct 35179 CGTGTTGCTGACTACCA 35163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397556366290640