Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016- 06-02] 2,401 sequences; 41,308,709 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq411 118 4e-21 >seq411 Length=58034 Score = 118 bits (130), Expect = 4e-21 Identities = 216/314 (69%), Gaps = 2/314 (1%) Strand=Plus/Plus Query 12733 AACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACC 12792 ||||||||| ||| || |||||||| | | ||| || ||||| || | ||||||||| Sbjct 43176 AACATCGTAGTAGATGACGTTCATGCCCATAGCCTCAGCGAGGACGGACAGCTGAGAACC 43235 Query 12793 AATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGA 12852 ||||| ||| || || || ||||| || ||||| |||| || || | || || | ||| Sbjct 43236 AATGTGACCGTAGCCAACGATACCCAGAGTCTTGCCTCGAATCTCCCAGC-ACTTGGAGC 43294 Query 12853 AG-TCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAA 12911 | ||||||||| ||||| |||| | || ||| || ||| |||| |||||| | || Sbjct 43295 TGACCTTGTTCCAGGTGCCTCGGTGCATCTCGTTGGATCGATCGCCAAGCTGACGGGCAA 43354 Query 12912 GATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAAT 12971 || || | | | |||| ||||| || || || | | |||| ||||| || | Sbjct 43355 GAACGATGATCTCGGCGATGACCAGCTCAGCGACACTGCGCGAGTTGGCGAAGGGGGAGT 43414 Query 12972 TAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGC 13031 | ||||| || || || |||| || | || || | ||||| | | ||| || | Sbjct 43415 TGAAGACGGCGATACCATTCTTGGCGGCGAACTCAAGGTCGACCTGGTTGGTACCGATAC 43474 Query 13032 AGAAGCATCCTATG 13045 |||| || || ||| Sbjct 43475 AGAAACAGCCGATG 43488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884828415593093