Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq199 710 0.0 >seq199 Length=7895 Score = 710 bits (786), Expect = 0.0 Identities = 559/663 (84%), Gaps = 10/663 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 2061 TGTAAAGTTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 2120 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2121 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 2180 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || Sbjct 2181 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGTTT 2240 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACTCTTCTGCGG 261 |||||||||| | |||| ||| | || ||| || ||||||||||| | | Sbjct 2241 ATGACCAGACTTGGGCTTGGTTGATCATCTGGGGTTCTC-CCCAGTGCACTCTTC--CAG 2297 Query 262 T-CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320 | |||||||||||||| | | | |||||||| | |||||||||||| | |||||| Sbjct 2298 TCCAGGCCAGCATCAGTTTTCCCCGGGGGATAAAGACTTCGGGAATGTGGCTCTCTTCGG 2357 Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTA 380 || ||||||||||||| ||| ||| | | | |||||||||| ||||| | || | Sbjct 2358 GGAGTGTTATAGCCCGTTGTGTAATAC-CCTGGGGGGGACTGAGGTTCGCGCATCTGCAA 2416 Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 |||||||||||||||||| | | || ||||||||| |||||||||||||||||| | Sbjct 2417 GGATGCTGGCGTAATGGTCATCAACGACCCGTCTTGAAACACGGACCAAGGAGTCGTCCT 2476 Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500 |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| || Sbjct 2477 CGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA- 2535 Query 501 CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560 | || ||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2536 ---GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCAT 2592 Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620 | | |||||||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct 2593 ACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACT 2652 Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 ||||||||||||||||||||||||| ||||||||||||||||||||| |||| || |||| Sbjct 2653 CTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGG 2712 Query 681 CGA 683 ||| Sbjct 2713 CGA 2715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079960489100