Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016-
06-02] 1,842 sequences; 41,955,053 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq199 607 2e-171
seq1111 95.1 4e-17
>seq199
Length=7895
Score = 607 bits (672), Expect = 2e-171
Identities = 389/423 (92%), Gaps = 1/423 (0%)
Strand=Plus/Minus
Query 82 TTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAA 141
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 7895 TTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTTTCTCAGGCTCCTTCTCCGGGG 7836
Query 142 TCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAA 201
|||| |||||| | ||||||||||||| |||||| | ||||| || || | |||||||
Sbjct 7835 TCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTTGGCCAATACCCAAACATCGAA 7776
Query 202 AGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAA 261
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 7775 AGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCACAAGGCCATGCGATTCGAGGA 7716
Query 262 GTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACC 321
||||| ||||||||||| |||||||||||||| ||||||||| |||||||||||||| |
Sbjct 7715 GTTATCATGAATCACCAGTGAGCCCCGAAGGGCATTGGTTTTTAATCTAATAAATACATC 7656
Query 322 CCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT 381
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 7655 CCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAAGT 7596
Query 382 AGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441
||||||||||||||||||||||||||||| || ||||||||||||||||||||| | |||
Sbjct 7595 AGTAAGGTACTATCAAATAAACGATAACTTATATAATGAGCCATTCGCAGTTTCGCGGTA 7536
Query 442 TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 501
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7535 TA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 7477
Query 502 CAG 504
|||
Sbjct 7476 CAG 7474
Score = 147 bits (162), Expect = 7e-33
Identities = 81/81 (100%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 81 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 22
Query 61 CCCCGTGTCGGGATTGGGTAA 81
|||||||||||||||||||||
Sbjct 21 CCCCGTGTCGGGATTGGGTAA 1
>seq1111
Length=5073
Score = 95.1 bits (104), Expect = 4e-17
Identities = 52/52 (100%), Gaps = 0/52 (0%)
Strand=Plus/Plus
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 52
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510372178432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |