Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2054464_20[genbank_20GCA_5F001654545.1_202016- 06-02] 1,842 sequences; 41,955,053 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq701 358 5e-94 seq413 210 2e-49 >seq701 Length=4748 Score = 358 bits (396), Expect = 5e-94 Identities = 1223/1878 (65%), Gaps = 46/1878 (2%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| || | | |||||| |||| || | ||| |||||||||||||| Sbjct 3174 ATCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGT 3115 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||||||| ||| || | ||| ||||| || | || |||| | | || Sbjct 3114 CTTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATAC-TGGTGATCTTGCCCATCGTGGGG 3057 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || |||| ||||| |||||| ||| | ||| ||||| |||||| Sbjct 3056 TCCTTCATGTGAATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCC 2997 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | || || | || || ||||||||||| ||||||||||| | | | || || Sbjct 2996 ATCTGAACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGA-GCCTTGACATC 2938 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 || || | ||||| ||| | |||||| ||||| ||||| || ||| Sbjct 2937 GGCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCAT 2878 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACT 65431 | || ||||||| ||||| |||| ||| | |||| | || | | |||| || Sbjct 2877 AGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC--AGCCAGGGGTTGACAACC 2820 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||||| || | || ||||| || ||||| ||||| ||| ||| || ||| | Sbjct 2819 TGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCAC 2760 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| | ||| |||| ||| ||||| ||||| ||||||| | || | Sbjct 2759 TCGTTGTTGCCCAAAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCGAGGAGCAGACTG 2700 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACATCGGTTT 65610 || || | |||| | | | | | || | | || ||||||| ||| | | | Sbjct 2699 TTACGGATGCCGTGTGTCTTGACTTCCTCTCGAAGAGTC-TCCCAGTCCCAGA---GGTC 2644 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 | | | | | ||| |||||| || || ||| | || | ||| || ||||| Sbjct 2643 AGAG--GGCTTG-ACGTTCCACATGTCAAACTGGAGGATACCCTCAGAGGCGGGGGAACC 2587 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730 ||| | ||| ||||||||||| || || || | || ||| || || Sbjct 2586 CTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAGGCAGTGAGGGCAGC 2527 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGG 65790 ||| |||||||| || || | || || ||||| ||||| |||| | || Sbjct 2526 GTGATAGATGGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGG 2467 Query 65791 CATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 ||||| || | |||| || || || || ||||| |||| ||| ||||| || || Sbjct 2466 CATACGCAGAGCAAGGAAAGCATCAGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTG 2407 Query 65851 ACGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 |||| || | || || |||| | |||||||||| || | |||||| || Sbjct 2406 GCGCATGTT--ACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTG 2349 Query 65909 TTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAA--ATGTT 65966 |||| ||||| | || || || || |||| | | ||| || | | | | Sbjct 2348 TTCAGGTTGCGAATAACAACCTGACTGACCTTATGCAACTTCTTGAAGTCGTAGCAAGCT 2289 Query 65967 TAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGC 66026 | |||| || | || ||| || | ||||| || ||||||| Sbjct 2288 TC-----ATCGTAGTTGATG---------AAGGAGGGCAGAGACAGAGAGGCAAGGTTGC 2243 Query 66027 AGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGC 66086 ||||||| | ||||||||| || ||||||| |||||| ||||| || || || | Sbjct 2242 AGACAGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTC 2183 Query 66087 GTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGT 66146 | ||||| || | |||| ||| || |||||||| ||||| ||||||||||| | |||| Sbjct 2182 GGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGA 2123 Query 66147 ACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCA 66206 | || | ||||||||| |||| ||||| ||||||| |||||| | ||||| | Sbjct 2122 ATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGA 2063 Query 66207 CCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCA 66265 || | | | |||| | | | | ||||| | |||||| || ||||| || Sbjct 2062 TGGT-CTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCT 2004 Query 66266 CCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCC 66325 || | |||| || | || |||| || || |||||||| | ||| ||||| | | Sbjct 2003 CCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTC 1944 Query 66326 TGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCT 66385 | ||| ||||| ||| || |||||||| ||||| ||||| ||| ||||| || || Sbjct 1943 TTTTCAACACGTTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCA 1884 Query 66386 CGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGC 66445 || |||||| | ||||| || || || | || | ||| || |||| || | ||| Sbjct 1883 CGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAAGAAATCGAAGACATCAGAGTGC 1824 Query 66446 CATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAG 66505 || || || ||||||||||| || | || || ||| |||||| |||||||| || Sbjct 1823 CAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATAC 1764 Query 66506 CGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTG 66565 ||||| |||||||||||||| | ||| || || | || || ||| | || ||||| Sbjct 1763 CGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAATACCATTCGATGTACCGTTGGTA 1704 Query 66566 CCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCC 66625 ||| ||||| || || || || ||| ||| ||||| |||||||||||||| ||| Sbjct 1703 CCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCC 1644 Query 66626 GTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCAC 66683 |||| ||||| ||||| || | | | || | | || || ||||| ||| Sbjct 1643 ATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC--GTAGATTCCCTCAATACTGTCGT 1586 Query 66684 CCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGA 66743 |||| || | | | |||| || | |||||| | || ||| |||| ||||| Sbjct 1585 CCTTCATATCAACCAAGAAGCAAGATGATAATTGGGGCTGAGGAGTGCCGGCATTGAAGA 1526 Query 66744 GGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAG 66803 | ||||| | ||| ||||| ||| | | || |||||| |||||| ||||| | ||| Sbjct 1525 GCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTC 1466 Query 66804 CATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGT 66862 || || | || || || || | | |||| ||||| | | || ||||| || Sbjct 1465 GCTCGATATCATCACCCCAGATACCAACAGACACA-CGCATGATCATGTGCTGAGGGCGC 1407 Query 66863 TCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAG 66922 ||||| | | | | | || | | | ||| || || |||| ||||||| |||||| Sbjct 1406 TCGACAATCTTACCGTCAATTTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAG 1347 Query 66923 TACGAGTAATTGAAATCG 66940 || ||| | ||||||| Sbjct 1346 TATTGGTATTGGAAATCG 1329 >seq413 Length=40179 Score = 210 bits (232), Expect = 2e-49 Identities = 567/857 (66%), Gaps = 24/857 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || |||||||||||||| | |||||| | ||| | Sbjct 36007 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 35948 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || | | | ||| || ||| | Sbjct 35947 TCCAAGGATCTTCACGACTGGAACAACCGCCTGACTGCTGATGAGCAGTTCTTCGTCTCT 35888 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || || ||||||||||| ||||| | | || || Sbjct 35887 CACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAGCGA 35828 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| ||||| || | | ||||| ||||| ||||||||||||||||| ||| Sbjct 35827 TTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATG 35768 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| | ||||| |||| ||| | |||||||| || ||||||| ||||| || Sbjct 35767 GAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGAGCCCGCC 35708 Query 61384 GAACGTGAAC-GAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA---- 61437 | | |||| || | ||||| ||||| ||||| || || || | | |||| Sbjct 35707 CA--GCGAACATATCTCTTCAACGCCATTGAGACCATTCC----CTGCATCCGAAAGAAG 35654 Query 61438 GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGC 61495 || || |||||| || ||||| |||| | || | || | |||| | || | Sbjct 35653 GCTGACTGGGCCATCCGATGGAT--CCAGGATAAGGACTCCTCCTTTGCCCAGCGTCTCG 35596 Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 | || ||||| | || |||||| | || |||||||| | || ||| | ||||| ||| Sbjct 35595 TTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGCGCCTTCGCCTCTATCTTCTGGC 35536 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 | ||||| ||||| || ||||| |||||||||||| ||| ||| | || || || |||| Sbjct 35535 TCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACG 35476 Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCCG 61674 |||| | || ||| ||||| | || || || || | || | |||| | Sbjct 35475 AGGGTCTTCACACTGACTTTGC---CTGCCTCCTC-CACTCTCACCTCAAGGGTCGTGCC 35420 Query 61675 TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTG 61734 || || | || || | ||| || || || || || ||||| || || Sbjct 35419 AGTAAGCAGATGATCCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCCTC 35360 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 || || ||| | ||| | ||| |||||||||| | || || ||| |||||| ||| Sbjct 35359 ACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTACATT 35300 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 || || || || || ||||| | |||| | | || | || | |||| || | | Sbjct 35299 GAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCACC 35240 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 ||||| || || |||||||| | || || || | |||||||| || || |||||||| Sbjct 35239 AACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAG 35180 Query 61915 CGTGTAGGCGACTATCA 61931 ||||| | ||||| || Sbjct 35179 CGTGTTGCTGACTACCA 35163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397559074846880