Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq567 279 8e-73 seq233 104 4e-20 >seq567 Length=7820 Score = 279 bits (308), Expect = 8e-73 Identities = 202/229 (88%), Gaps = 5/229 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 2707 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 2764 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | |||||| Sbjct 2765 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 2824 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||||||| |||| ||||| || |||| || | | ||||||||||||||||||| Sbjct 2825 ACCCGGACCTTTCGGACAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 2882 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2883 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 2931 >seq233 Length=72124 Score = 104 bits (114), Expect = 4e-20 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 |||||||| | | |||||||||||| ||||||||||||||||||||| ||| |||||| Sbjct 20939 ACTCGTTGGCTCCGCCAGTGTAGCGCGTGTGCGGCCCAGAACATCTAAGTGCAACACAGA 20880 Query 207 CCTGTTATTGCCTCAAA 223 ||||||||||||||||| Sbjct 20879 CCTGTTATTGCCTCAAA 20863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751992926265