Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27]
971 sequences; 46,623,205 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq567 279 8e-73
seq233 104 4e-20
>seq567
Length=7820
Score = 279 bits (308), Expect = 8e-73
Identities = 202/229 (88%), Gaps = 5/229 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 2707 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 2764
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | ||||||
Sbjct 2765 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 2824
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||||||| |||| ||||| || |||| || | | |||||||||||||||||||
Sbjct 2825 ACCCGGACCTTTCGGACAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 2882
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2883 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 2931
>seq233
Length=72124
Score = 104 bits (114), Expect = 4e-20
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206
|||||||| | | |||||||||||| ||||||||||||||||||||| ||| ||||||
Sbjct 20939 ACTCGTTGGCTCCGCCAGTGTAGCGCGTGTGCGGCCCAGAACATCTAAGTGCAACACAGA 20880
Query 207 CCTGTTATTGCCTCAAA 223
|||||||||||||||||
Sbjct 20879 CCTGTTATTGCCTCAAA 20863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751992926265
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |