Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27]
971 sequences; 46,623,205 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq567 367 2e-99
seq233 141 1e-31
>seq567
Length=7820
Score = 367 bits (406), Expect = 2e-99
Identities = 239/259 (92%), Gaps = 3/259 (1%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2849 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2908
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||
Sbjct 2909 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 2967
Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| ||| || | || |||||||||||||||||||||||||||||||||||| ||||
Sbjct 2968 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 3026
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 3027 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 3086
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 3087 AAAGAGCTCTCAATCTGTC 3105
>seq233
Length=72124
Score = 141 bits (156), Expect = 1e-31
Identities = 107/125 (86%), Gaps = 7/125 (6%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||| |||||||||||| ||||||||||||||||||||| ||| |||||
Sbjct 20940 TACTCGTTGGCTCCGCCAGTGTAGCGCGTGTGCGGCCCAGAACATCTAAGTGCAACACAG 20881
Query 61 ACCTGTTATTGCCT------CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA 114
|||||||||||||| ||||||||||| ||| | |||| ||| |||||||||||
Sbjct 20880 ACCTGTTATTGCCTCAAANNCAAACTTCCATCGGCCTG-AGCCGGTAGCCCCTCTAAGAA 20822
Query 115 GCCAG 119
|||||
Sbjct 20821 GCCAG 20817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796792504851
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |