Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq567 443 4e-122 seq233 156 8e-36 seq149 107 4e-21 >seq567 Length=7820 Score = 443 bits (490), Expect = 4e-122 Identities = 284/309 (92%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | ||| |||||||||| Sbjct 3014 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 2955 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2954 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 2895 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| ||| Sbjct 2894 GATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTACTT--CCTTGTCCG 2837 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2836 AAAGGTCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 2777 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 2776 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 2717 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 2716 CCCTTTGTA 2708 >seq233 Length=72124 Score = 156 bits (172), Expect = 8e-36 Identities = 107/121 (88%), Gaps = 6/121 (5%) Strand=Plus/Plus Query 70 GGCTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTG------AGGCAATAACAG 123 |||||||||||||| ||| ||||||| ||||||||||||||| |||||||||||| Sbjct 20819 GGCTTCTTAGAGGGGCTACCGGCTCAGGCCGATGGAAGTTTGNNTTTGAGGCAATAACAG 20878 Query 124 GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG 183 ||||||| ||| ||||||||||||||||||||| |||||||||||| | ||||||||||| Sbjct 20879 GTCTGTGTTGCACTTAGATGTTCTGGGCCGCACACGCGCTACACTGGCGGAGCCAACGAG 20938 Query 184 T 184 | Sbjct 20939 T 20939 >seq149 Length=416830 Score = 107 bits (118), Expect = 4e-21 Identities = 100/126 (79%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 107 GTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACA 166 ||||| ||||| ||||||||| |||| ||| ||| |||| | |||||||||| ||| Sbjct 219487 GTTTGGGGCAAATACAGGTCTGGTATGCTCTTGGATATTCTTGATCGCACGCGCGTGACA 219428 Query 167 CTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTC 226 |||| |||||| ||||| || ||||| ||| |||||| | ||| ||||||||||||| Sbjct 219427 CTGATGGAGCCAGCGAGT--ATTTCCTTGCCCGAAAGGTCCGAGTATTCTTGTTAAACTC 219370 Query 227 TGTCGT 232 ||||| Sbjct 219369 CGTCGT 219364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947190802688