Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20Na10_20[genbank_20GCA_5F002234255.1_202017-07-27] 971 sequences; 46,623,205 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq445 122 3e-22 >seq445 Length=411677 Score = 122 bits (134), Expect = 3e-22 Identities = 217/314 (69%), Gaps = 2/314 (1%) Strand=Plus/Plus Query 12733 AACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACC 12792 ||||||||| ||| || |||||||| | | ||| || ||||| || | ||||||||| Sbjct 45993 AACATCGTAGTAGATGACGTTCATGCCCATAGCCTCAGCGAGGACGGATAGCTGAGAACC 46052 Query 12793 AATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGA 12852 ||||| ||| || || || ||||| || ||||| |||| || || | || || | ||| Sbjct 46053 AATGTGACCGTAGCCAACGATACCCAGAGTCTTGCCTCGAATCTCCCAGC-ACTTGGAGC 46111 Query 12853 AG-TCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAA 12911 | ||||||||| ||||| |||| | || ||| || || |||| |||||||| || Sbjct 46112 TGACCTTGTTCCAGGTGCCTCGGTGCATCTCGTTGGATCGGTCACCAAGCTGACGAGCAA 46171 Query 12912 GATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAAT 12971 || || | | | |||| |||||| || || || | | |||| ||||| || | Sbjct 46172 GAACGATGATCTCGGCGATGACGAGCTCAGCGACACTGCGCGAGTTGGCGAAGGGGGAGT 46231 Query 12972 TAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGC 13031 | ||||| || || || |||| || | || || | ||||| | | ||| || | Sbjct 46232 TGAAGACGGCGATACCATTCTTGGCGGCGAACTCAAGGTCGACCTGGTTGGTACCGATAC 46291 Query 13032 AGAAGCATCCTATG 13045 |||| || || ||| Sbjct 46292 AGAAACAGCCGATG 46305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884862950246103