Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13]
43 sequences; 45,458,781 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq18 163 2e-38
seq12 113 3e-23
>seq18
Length=9433
Score = 163 bits (180), Expect = 2e-38
Identities = 107/117 (91%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| || ||||||| |||||| || ||
Sbjct 5855 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGTCC 5913
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 5914 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 5970
>seq12
Length=5052385
Score = 113 bits (124), Expect = 3e-23
Identities = 88/104 (85%), Gaps = 1/104 (1%)
Strand=Plus/Minus
Query 11 ACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGT 70
||||| |||||| ||||||||| | ||||||| |||||| | ||||||||||||
Sbjct 2744567 ACTTTAATTTCTTGTAAGGTGCTAAATAGGTCAAAAA-ATAACACTGTCCGATCCCTAGT 2744509
Query 71 CGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114
||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2744508 TGGCATAGTTTATAGTTAAGACTACGACGGTATCTGATCGTCTT 2744465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278399887770
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |