Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq18 163 2e-38 seq12 113 3e-23 >seq18 Length=9433 Score = 163 bits (180), Expect = 2e-38 Identities = 107/117 (91%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| || ||||||| |||||| || || Sbjct 5855 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGTCC 5913 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 5914 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 5970 >seq12 Length=5052385 Score = 113 bits (124), Expect = 3e-23 Identities = 88/104 (85%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 11 ACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGT 70 ||||| |||||| ||||||||| | ||||||| |||||| | |||||||||||| Sbjct 2744567 ACTTTAATTTCTTGTAAGGTGCTAAATAGGTCAAAAA-ATAACACTGTCCGATCCCTAGT 2744509 Query 71 CGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 ||||||||||| |||||||||||||||||||||||||||||| Sbjct 2744508 TGGCATAGTTTATAGTTAAGACTACGACGGTATCTGATCGTCTT 2744465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399887770