Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq18 367 2e-99 seq12 242 6e-62 >seq18 Length=9433 Score = 367 bits (406), Expect = 2e-99 Identities = 239/259 (92%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5471 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 5530 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| Sbjct 5531 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 5589 Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | ||| || | || |||||||||||||||||||||||||||||||||||| |||| Sbjct 5590 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 5648 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 5649 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 5708 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 5709 AAAGAGCTCTCAATCTGTC 5727 >seq12 Length=5052385 Score = 242 bits (268), Expect = 6e-62 Identities = 211/258 (82%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||| | | |||| || ||||||||||||||||||||||||| |||||||||||| |||| Sbjct 2744961 TACTTGCTAGCTCTGTTAGTGTAGCGCGCGTGCGGCCCAGAATATCTAAGGGCATTACAG 2744902 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 |||||||||| ||| ||||||| ||||||| |||| ||||||||||||||||||||||| Sbjct 2744901 ACCTGTTATTACCTTAAACTTCTATTGGCT-TAAGCTAATAGTCCCTCTAAGAAGCCAGC 2744843 Query 121 CACCAACCATAGTCGAT-GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | | | || | || ||||||||||||||||||||||| ||| |||| | |||| Sbjct 2744842 GTACTGCTAAAG-CAATACAGGCTATTTAGCAGGTTAAGGTCTTGTTTATTATTGCAATT 2744784 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || |||| |||| ||| || ||||||||||||| || || || ||| | | ||| ||| Sbjct 2744783 AAGCAGATAAATTACTTTACTAACTAAGAACGGCTATATACTACTACCTACAAAATTAAG 2744724 Query 240 AAAGAGCTATCAATCTGT 257 |||||||| | ||||||| Sbjct 2744723 AAAGAGCTCTTAATCTGT 2744706 Score = 149 bits (164), Expect = 1e-33 Identities = 105/119 (88%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||| ||||||||||||| | ||||| ||||||||||||||||||| |||| Sbjct 4882949 TACTCGCTGGCTGCGTCAGTGTAGCGTGTGTGCGACCCAGAACATCTAAGGGCAGCACAC 4882890 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 ||||||||||||||||||||||||| |||| ||||| |||| ||||| ||||| |||| Sbjct 4882889 ACCTGTTATTGCCTCAAACTTCCATCGGCT-TAAGCCGATAGCCCCTCAAAGAAACCAG 4882832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799668083