Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13]
43 sequences; 45,458,781 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq18 367 2e-99
seq12 242 6e-62
>seq18
Length=9433
Score = 367 bits (406), Expect = 2e-99
Identities = 239/259 (92%), Gaps = 3/259 (1%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5471 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 5530
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||
Sbjct 5531 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 5589
Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| ||| || | || |||||||||||||||||||||||||||||||||||| ||||
Sbjct 5590 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 5648
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 5649 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 5708
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 5709 AAAGAGCTCTCAATCTGTC 5727
>seq12
Length=5052385
Score = 242 bits (268), Expect = 6e-62
Identities = 211/258 (82%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||| | | |||| || ||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 2744961 TACTTGCTAGCTCTGTTAGTGTAGCGCGCGTGCGGCCCAGAATATCTAAGGGCATTACAG 2744902
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
|||||||||| ||| ||||||| ||||||| |||| |||||||||||||||||||||||
Sbjct 2744901 ACCTGTTATTACCTTAAACTTCTATTGGCT-TAAGCTAATAGTCCCTCTAAGAAGCCAGC 2744843
Query 121 CACCAACCATAGTCGAT-GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| | | || | || ||||||||||||||||||||||| ||| |||| | ||||
Sbjct 2744842 GTACTGCTAAAG-CAATACAGGCTATTTAGCAGGTTAAGGTCTTGTTTATTATTGCAATT 2744784
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| |||| |||| ||| || ||||||||||||| || || || ||| | | ||| |||
Sbjct 2744783 AAGCAGATAAATTACTTTACTAACTAAGAACGGCTATATACTACTACCTACAAAATTAAG 2744724
Query 240 AAAGAGCTATCAATCTGT 257
|||||||| | |||||||
Sbjct 2744723 AAAGAGCTCTTAATCTGT 2744706
Score = 149 bits (164), Expect = 1e-33
Identities = 105/119 (88%), Gaps = 1/119 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| ||||| ||||||||||||| | ||||| ||||||||||||||||||| ||||
Sbjct 4882949 TACTCGCTGGCTGCGTCAGTGTAGCGTGTGTGCGACCCAGAACATCTAAGGGCAGCACAC 4882890
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119
||||||||||||||||||||||||| |||| ||||| |||| ||||| ||||| ||||
Sbjct 4882889 ACCTGTTATTGCCTCAAACTTCCATCGGCT-TAAGCCGATAGCCCCTCAAAGAAACCAG 4882832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796799668083
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |