Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13]
43 sequences; 45,458,781 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq18 100 2e-19
seq12 82.4 5e-14
>seq18
Length=9433
Score = 100 bits (110), Expect = 2e-19
Identities = 70/76 (92%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||| ||||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 5289 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 5346
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 5347 TAAT-CAACGCAAGCT 5361
>seq12
Length=5052385
Score = 82.4 bits (90), Expect = 5e-14
Identities = 58/64 (91%), Gaps = 2/64 (3%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|| |||||||||||| || |||||||| ||||||||||| ||||| ||||||||||||||
Sbjct 2745143 CTTACTAAGCCATTTAAT-CGGTAGTA-GCGACGGGCGGTGTGTATAAAGGGCAGGGACG 2745086
Query 109 TAAT 112
||||
Sbjct 2745085 TAAT 2745082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300799878740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |