Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq18 100 2e-19 seq12 82.4 5e-14 >seq18 Length=9433 Score = 100 bits (110), Expect = 2e-19 Identities = 70/76 (92%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||| ||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 5289 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 5346 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 5347 TAAT-CAACGCAAGCT 5361 >seq12 Length=5052385 Score = 82.4 bits (90), Expect = 5e-14 Identities = 58/64 (91%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 || |||||||||||| || |||||||| ||||||||||| ||||| |||||||||||||| Sbjct 2745143 CTTACTAAGCCATTTAAT-CGGTAGTA-GCGACGGGCGGTGTGTATAAAGGGCAGGGACG 2745086 Query 109 TAAT 112 |||| Sbjct 2745085 TAAT 2745082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799878740