Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13]
43 sequences; 45,458,781 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq18 242 6e-62
>seq18
Length=9433
Score = 242 bits (268), Expect = 6e-62
Identities = 227/282 (80%), Gaps = 14/282 (5%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 1723 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1666
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1665 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1606
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | | || |||| | ||| |||| | |||||||||||||| |
Sbjct 1605 GAACGCGGTGATAC-CACCCGCACGT-ATAGACGGACAAGAATAGGCTTCGGCTTTGTGT 1548
Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||||||||| | | |||| || |||||||| | | | | | ||| ||
Sbjct 1547 CTTAGCAGGCGATTCTTCCACGGCGCTC-----GAAGCGCGTCGTGGT-ATTTCGCGTAT 1494
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||||| || | || ||| ||||||||||||||||||
Sbjct 1493 TGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 1452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199658752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |