Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq39 405 4e-108 seq3 203 3e-47 >seq39 Length=4506647 Score = 405 bits (448), Expect = 4e-108 Identities = 1236/1881 (66%), Gaps = 52/1881 (3%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| || | | |||||| |||| || | ||| |||||||||||||| Sbjct 1597399 ATCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGT 1597458 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAA-TGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||||||| ||| || | ||| ||||| || | || |||| | | || Sbjct 1597459 CTTGAGGCCAAGTTTCCA-GCCTGCAAAGTGCATAC-TGGTGATCTTGCCCATCGTGGGG 1597516 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || |||| ||||| |||||| ||| | ||| ||||| |||||| Sbjct 1597517 TCCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCC 1597576 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GC---GACGTAC 65310 || | || || | || || ||||||||||| ||||||||||| || ||||| | Sbjct 1597577 ATCTGAACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACGT-C 1597635 Query 65311 CTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACG 65370 || || || | ||||| ||| | |||||| ||||| ||||| || Sbjct 1597636 GGCA---GGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTT 1597692 Query 65371 CATCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACG-ATTGATG 65428 ||| | || ||||||| ||||| |||| ||| | |||| | || | | ||||| Sbjct 1597693 CATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC--AGCCAGGGATTGACA 1597750 Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 || |||||||| || | || ||||| || ||||| ||||| ||| ||| || ||| Sbjct 1597751 ACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAG 1597810 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 | || ||||||| ||||| |||| ||| ||||| ||||| ||||| | | || Sbjct 1597811 CACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGA 1597870 Query 65549 GAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACATCGG 65607 ||| || | |||| | | | | | || | | || ||||| | ||| | || Sbjct 1597871 CTGTTACGGATGCCGTGTGTCTTGACTTCCTCTCGAAGAGTC-TCCCAATCCCAGA--GG 1597927 Query 65608 TTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGA 65667 | || | | | ||| |||||| || |||||| | || | || || || Sbjct 1597928 TC---CGAGGGCTTG-ACGTTCCACATGTCAAACTGCAGGATACCCTCAGATGCGGGGGA 1597983 Query 65668 ACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGC 65727 ||| ||| | ||| ||||||||||| || || || | || ||| || Sbjct 1597984 ACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAGGCAGTGAGGGC 1598043 Query 65728 GGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTA 65787 || |||||||||||| || || | || || ||||| ||||| |||| | Sbjct 1598044 AGCGTGATAAATGGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAA 1598103 Query 65788 CGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847 ||||||| || | ||||| ||||| || |||||||| |||| ||| ||||| || Sbjct 1598104 GGGCATACGCAGAGCAAGAAAAGCATCGGCAAGGCCTTGAACACCAAGACCAATGGGTCG 1598163 Query 65848 ATGACGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATCGATAATG 65905 || |||| || | || || |||| | |||||||||| || | |||||| || Sbjct 1598164 GTGGCGCATGTT--ACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATC 1598221 Query 65906 CGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAA--AT 65963 |||| ||||| | || || || || |||| | | ||| || | | Sbjct 1598222 TTGTTCAGGTTGCGAATAACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCGTAGCAA 1598281 Query 65964 GTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGT 66023 | || |||| || | || ||| || | ||||| || |||| Sbjct 1598282 GCTTC-----ATCGTAGTTGATG---------AAGGAGGGCAGAGACAGAGAGGCAAGGT 1598327 Query 66024 TGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGC 66083 |||||||||| | |||||||||||| ||||||| |||||| ||||| || || || Sbjct 1598328 TGCAGACAGCGACCTCGTCAGGAGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGC 1598387 Query 66084 AGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCA 66143 || ||||| || | |||| ||| ||||||||||| ||||| ||||||||||| | || Sbjct 1598388 TTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCCTTGTAGAGCA 1598447 Query 66144 TGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCT 66203 || | || | ||||||||| |||| ||| | ||||||| |||||| | |||| Sbjct 1598448 TGAATGGGTTTCCGGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAAAGCTTTTGAGCCT 1598507 Query 66204 TCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGAT 66262 | | || | | | |||| | | | | ||||| | |||||| || ||||| Sbjct 1598508 TGATGGT-CTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCC 1598566 Query 66263 TCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCA 66322 || || | |||| || | || |||| || ||||||||||| | ||| ||||| Sbjct 1598567 TCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCG 1598626 Query 66323 TCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGT 66382 | || ||| ||||| ||| || |||||||| ||||| ||||| ||| ||||| || Sbjct 1598627 TTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGG 1598686 Query 66383 GCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442 || || |||||| | ||||| || || || | || ||||| || |||| || | Sbjct 1598687 GCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAAATCGAAGACATCAGAG 1598746 Query 66443 TGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACG 66502 ||||| || || ||||||||||| || | || || ||| |||||| |||||||| Sbjct 1598747 TGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACA 1598806 Query 66503 TAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTG 66562 || ||||| |||||||||||||| | ||| || || | || || ||| | || ||| Sbjct 1598807 TACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCATTCGATGTACCGTTG 1598866 Query 66563 GTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCG 66622 || ||| ||||| || || || || ||| ||| ||||| |||||||||||||| Sbjct 1598867 GTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGACCAATACCACCA 1598926 Query 66623 GCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGT 66680 ||| |||| ||||| ||||| || | | | || | | || || ||||| || Sbjct 1598927 GCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC--GTAGATTCCCTCAATACTGT 1598984 Query 66681 CACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGA 66740 | |||| || || | | |||| || | |||||| | || ||| |||| || Sbjct 1598985 CGTCCTTCATATCCACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGA 1599044 Query 66741 AGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGA 66800 |||| ||||| | ||| ||||| ||| | | || ||||||| |||||| ||||| | || Sbjct 1599045 AGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATGAGATTGTATGTCTCCAAGA 1599104 Query 66801 CAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGC 66859 | || || | || || || || | | |||| ||||| | | || ||||| Sbjct 1599105 CTCGCTCGATATCATCACCCCAGATACCAACAGACACA-CGCATGATCATGTGCTGAGGG 1599163 Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919 || ||||| | | | | | || | | | ||| || || |||| ||||||| ||| Sbjct 1599164 CGCTCGACAATCTTACCGTCAATCTTAAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCA 1599223 Query 66920 AAGTACGAGTAATTGAAATCG 66940 ||||| ||| | ||||||| Sbjct 1599224 AAGTATTGGTATTGGAAATCG 1599244 >seq3 Length=2226179 Score = 203 bits (224), Expect = 3e-47 Identities = 569/860 (66%), Gaps = 30/860 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || |||||||||||||| | |||||| | ||| | Sbjct 1538641 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 1538700 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || || | | ||| | || ||| || Sbjct 1538701 TCCAAGGATCTCCACGACTGGAACAACCGCCTAACT---GCTGATGAGCAGTTCTTTGTC 1538757 Query 61204 ---CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260 || | | || ||||| || || || || ||||||||||| ||||| | | || Sbjct 1538758 TCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAG 1538817 Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 || ||| ||||| || | | ||||| ||||| ||||||||||||||||| Sbjct 1538818 CGATTCAGTGGCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGCTTCCAGATCATG 1538877 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 |||||||| | || || |||| ||| | |||||||| || ||||||| |||| Sbjct 1538878 ATGGAGAACATTCATTCCGAGACCTACTCCCTCCTCATCGACACATACATCAAAGAGCCC 1538937 Query 61381 GCGGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA-- 61437 || | || | | || | ||||| ||||| ||||| || || || | | |||| Sbjct 1538938 GCCCAGCG-AACCTATCTCTTCAACGCCATTGAGACCATTCC----CTGCATCCGAAAGA 1538992 Query 61438 --GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATT 61493 || || |||||| || ||||| |||| | || | || | |||| | || | Sbjct 1538993 AGGCTGACTGGGCCATCCGATGGAT--CCAGGATAAGGACTCCTCCTTTGCCCAGCGTCT 1539050 Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | || ||||| | || |||||| | || || ||||| | || ||| | ||||| || Sbjct 1539051 CGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTTAGTGGTGCCTTCGCCTCTATCTTCTG 1539110 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 | | ||||| ||||| || ||||| |||||||| ||| ||| ||| | || || || || Sbjct 1539111 GCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCTCGTGA 1539170 Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTC 61672 ||| || | || ||| ||||| | || || || || | || | |||| Sbjct 1539171 CGAAGGTCTTCACACTGACTTTGC---CTGCCTCCTC-CACTCTCACCTCAAGGGTCGTG 1539226 Query 61673 CGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732 | || || | || || | ||| || || || || || ||||| || | Sbjct 1539227 CCAGTAAGCAGATGATCCAGGATATCATCATTGATGCCGTCACCATTGAGCAGGAGTTCC 1539286 Query 61733 TGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792 | || || ||| | ||| | ||| |||||||||| | || || ||| |||||| | Sbjct 1539287 TCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTACA 1539346 Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTATAATACG 61851 |||| || || || || ||||| | |||| | |||| ||| || | |||| || | Sbjct 1539347 TTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAATG-AGAAGGTCTACAAGGCC 1539405 Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 | ||||| || || |||||||| | || || || | ||||||||| || || |||||| Sbjct 1539406 ACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAG 1539465 Query 61912 AAACGTGTAGGCGACTATCA 61931 || ||||| | |||||| || Sbjct 1539466 AAGCGTGTTGCCGACTACCA 1539485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567791649520