Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20temperatum_20[genbank_20GCA_5F001513835.1_202016-01-13] 43 sequences; 45,458,781 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq23 127 8e-24 >seq23 Length=4947561 Score = 127 bits (140), Expect = 8e-24 Identities = 218/314 (69%), Gaps = 2/314 (1%) Strand=Plus/Minus Query 12733 AACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACC 12792 ||||||||| ||| || |||||||| | | ||| || ||||| || | ||||||||| Sbjct 4045101 AACATCGTAGTAGATGACGTTCATGCCCATAGCCTCAGCGAGGACGGATAGCTGAGAACC 4045042 Query 12793 AATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGA 12852 ||||| ||| || || || ||||| || ||||| |||| || || | || || | ||| Sbjct 4045041 AATGTGACCGTAGCCAACGATACCCAGAGTCTTGCCTCGAATCTCCCAGC-ACTTGGAGC 4044983 Query 12853 AG-TCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAA 12911 | ||||||||| ||||| |||| | || ||| || ||| |||| |||||| | || Sbjct 4044982 TGACCTTGTTCCAGGTGCCTCGGTGCATCTCGTTGGATCGATCACCAAGCTGACGGGCAA 4044923 Query 12912 GATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAAT 12971 || || | | | |||| ||||| || || || | | |||| ||||| || | Sbjct 4044922 GAACGATGATCTCGGCGATGACTAGCTCAGCGACACTGCGCGAGTTGGCGAAGGGGGAGT 4044863 Query 12972 TAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGC 13031 | ||||| || || || |||| || | || || | |||||| | | |||||| | Sbjct 4044862 TGAAGACGGCGATACCATTCTTGGCGGCGAACTCAAGGTCAACCTGGTTGGTACCAATAC 4044803 Query 13032 AGAAGCATCCTATG 13045 |||| || || ||| Sbjct 4044802 AGAAACAGCCGATG 4044789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885361545399