Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680535.1_202016-07-06]
15,093 sequences; 48,383,620 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1 731 0.0
seq4076 82.4 3e-13
>seq1
Length=7716
Score = 731 bits (810), Expect = 0.0
Identities = 565/663 (85%), Gaps = 10/663 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 2822 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 2763
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2762 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 2703
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2702 TGAAAAGAACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 2643
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
| |||||||||| | |||| ||| || || ||| | |||||||||||| | |
Sbjct 2642 GTGACCAGACTTGGGCTTGGTTGATCATCCAGGGTTCTC-CCTGGTGCACTCTTCCG-GC 2585
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||||||||||| | | | | |||||||||| |||||||||||| |||| ||||
Sbjct 2584 CCAGGCCAGCATCAGTTTGCCCCGGGGGATAAAGGCGTCGGGAATGTGGCTCCCTCCGGG 2525
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381
| |||||||||||||| | | ||| | | | |||||||||| ||||| || ||
Sbjct 2524 GAGTGTTATAGCCCGGCGCGCAATACCCTGAGGC-GGACTGAGGTTCGCGCATTCGCAAG 2466
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
||||||||||||||||| | || | ||||||||| |||||||||||||||||| | |
Sbjct 2465 GATGCTGGCGTAATGGTCATCAGTGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCTT 2407
Query 442 C-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500
| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| ||
Sbjct 2406 CGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA- 2348
Query 501 CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560
| || ||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2347 ---GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAGTAAGAGCAT 2291
Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620
| | |||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 2290 ACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACT 2231
Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||
Sbjct 2230 CTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGG 2171
Query 681 CGA 683
|||
Sbjct 2170 CGA 2168
>seq4076
Length=2451
Score = 82.4 bits (90), Expect = 3e-13
Identities = 108/145 (74%), Gaps = 5/145 (3%)
Strand=Plus/Plus
Query 206 ACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGGTC- 263
|||||||||| | |||| ||| || || ||| | ||||| |||||| |||||
Sbjct 99 ACCAGACTTGGGCTTGGTTGATCACCCAGGGTTCTCT-CTGGTGCGCTCTTC--CGGTCC 155
Query 264 AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGG 323
||||||||||||| | | | | |||||||| | ||||||| |||| |||| | |||
Sbjct 156 AGGCCAGCATCAGTTTGCCCCGGGGGATAAAGACGTCGGGAATCTGGCTCCCTCCAGGGA 215
Query 324 GTGTTATAGCCCGGGGTGGAATGCG 348
|||||||||||| | ||| ||| ||
Sbjct 216 GTGTTATAGCCCAGCGTGTAATACG 240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079676255150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |