Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680535.1_202016-07-06] 15,093 sequences; 48,383,620 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1 798 0.0 seq12035 264 4e-68 seq932 89.7 2e-15 >seq1 Length=7716 Score = 798 bits (884), Expect = 0.0 Identities = 500/537 (93%), Gaps = 5/537 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 407 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 466 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 467 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 526 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| |||||| ||| || || |||| |||||||||||| Sbjct 527 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACGA--AAATCCAGCCCCGCTTCATTGA 584 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| || Sbjct 585 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 641 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 642 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 701 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 702 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 761 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 762 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 821 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 822 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACT 881 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 882 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 938 >seq12035 Length=260 Score = 264 bits (292), Expect = 4e-68 Identities = 152/156 (97%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 260 ATCCATTCATGCCCCTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 201 Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 200 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTCAGAGCAC 141 Query 508 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||| ||||||||| Sbjct 140 TGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 105 Score = 172 bits (190), Expect = 2e-40 Identities = 104/110 (95%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 408 AATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467 ||||||||| || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AATTAGATGGCGGGGGCTTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 60 Query 468 CGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517 |||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 61 CGCGCTTGGTTGAATTACTTCACTTTGACATTCAGAGCACTGGCCAGAAA 110 >seq932 Length=13023 Score = 89.7 bits (98), Expect = 2e-15 Identities = 75/92 (82%), Gaps = 4/92 (4%) Strand=Plus/Plus Query 6 TCTTTTGCTCTACA----GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCG 61 ||||||| |||||| | |||||||||||||| |||| |||| |||||||||||||| Sbjct 4005 TCTTTTGTTCTACATATGGAAGATTTCTGTTCTCGATGAACCCCCTTTAGGACACCTGCG 4064 Query 62 TTATGGTTTAACAGATGTGCCGCCCCAGCCAA 93 |||| |||| | |||| | |||| ||||||| Sbjct 4065 TTATAGTTTGATAGATTTATCGCCTCAGCCAA 4096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634953199264