Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680595.1_202016-07-06]
22,979 sequences; 49,676,379 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq4 253 3e-65
>seq4
Length=7877
Score = 253 bits (280), Expect = 3e-65
Identities = 178/199 (89%), Gaps = 3/199 (2%)
Strand=Plus/Minus
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||
Sbjct 3024 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 2966
Query 121 CACCAACCATAGTCGATGGGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| ||| || | || || |||||||| |||||||||||||||||||||||| ||||
Sbjct 2965 GTACTGCCAAAG-CAATACGGACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATT 2907
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 2906 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 2847
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 2846 AAAGAGCTCTCAATCTGTC 2828
Score = 104 bits (114), Expect = 4e-20
Identities = 59/60 (98%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3516 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 3457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796622625099
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |