Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680595.1_202016-07-06] 22,979 sequences; 49,676,379 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8513 327 9e-85 seq3398 181 8e-41 >seq8513 Length=2088 Score = 327 bits (362), Expect = 9e-85 Identities = 1204/1853 (65%), Gaps = 46/1853 (2%) Strand=Plus/Plus Query 65101 AGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATA 65160 ||| || |||| || | || ||||||||||| ||||| ||||| | | | ||| Sbjct 4 AGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCC-GAGCTTCCAGCCGG 62 Query 65161 GAAA-TGCATCGATGATAATTTTGCATAAT-TCGGCTCGGCCACATGCATATTCAACGAC 65218 ||| ||||| | || | || |||| | | || || || || || || | ||| Sbjct 63 CAAAGTGCAT-GCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGAC 121 Query 65219 TGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGATACGACGTCCCGAT 65278 || |||||| ||| | ||| || || |||||||| | || || | || ||| Sbjct 122 TGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAA 181 Query 65279 ATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTG 65337 |||||||||||||||||||| ||| | | | ||||| || || | |||| ||| Sbjct 182 ATCTCCCAGACGGTCTTGTAGAGG-GCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTG 240 Query 65338 GACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATC 65397 || ||||| ||||| || || || ||| | || ||||||| |||| || Sbjct 241 GATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTC 300 Query 65398 GATAAGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAACTCGCCGGACAGTACACGA 65455 | ||| | |||| | || | | |||| ||| ||||||||||| | || ||||| Sbjct 301 AACAAGGTCCTTGAGC--AGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGG 358 Query 65456 CGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCA 65515 || ||||||||||| ||| || || ||| | || ||||||| || || || | | Sbjct 359 CGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAA 418 Query 65516 GTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATG 65575 ||| ||||| ||||| || || | || || ||| || | |||| | | | Sbjct 419 GTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACC 478 Query 65576 TTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATA 65635 | | || | | ||||||| ||| | | | | | | | || || |||||| Sbjct 479 TGCTCCCGGAGGTTCTCCCAGTCCCAGA---GGTCA--GAAGGCTTC-ACATTCCACATG 532 Query 65636 TCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCC 65695 || || || | || | ||| || || || ||| | ||| |||||| Sbjct 533 TCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCC 592 Query 65696 TCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCG 65754 |||||||| || || || | | | ||| || ||| || ||||||||||| || | Sbjct 593 TCCTTGGCCAGCTGCACCGAAGCAGT-GAGGGCAGCATGGTAGATGGTCTCGAAGATCTG 651 Query 65755 TCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTC 65814 || || ||||| ||||| |||| | ||||| | || | |||| || Sbjct 652 CTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAAGCATC 711 Query 65815 GGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTC 65874 || ||||| || || |||| ||| ||||| || || |||| ||| | || || Sbjct 712 AGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGCTTC 771 Query 65875 AGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCAC 65934 | |||||||||| || | |||||||| | |||| ||||| || || || Sbjct 772 CGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTGT 831 Query 65935 GATACGTCG--CAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACC 65992 || ||||| ||| | | ||| ||| | || | |||| ||| || Sbjct 832 GA--CGTCGTGCAACTTCTGGAAGTCATAGCA---AGCATCATCGT-AGTTGATGA---- 881 Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 || || || ||||| ||||| || |||||||||||||| | ||| ||||| ||| Sbjct 882 ACGAA----GGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAG 937 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 ||||||| ||| |||||||| ||||| || || |||||||||| |||| || || Sbjct 938 TACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTG 997 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 |||||||| ||||| |||||||| | |||| | || |||||||||| || | | Sbjct 998 CTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCC 1057 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT 66232 || | |||||| | ||| || | ||||||| || | | | |||| | | | Sbjct 1058 TCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGT-CTTGCGACCCTTGCCCGCCTT 1116 Query 66233 -TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACT--TCGGACAGACATGGA 66289 || || | |||||| || ||||| | | | ||||| |||| ||||| || Sbjct 1117 CTCATACTTTTCGTAAAGAGCCTCGAAC--TCCTCGCCATAGCAGTCGGCCAGACCGGGG 1174 Query 66290 CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGA 66349 |||| || |||||||| || | ||| ||||| | || || ||||| ||| || ||| Sbjct 1175 CACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGA 1234 Query 66350 TCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTT 66409 || || |||||||| || ||| || ||||| || || |||||| ||||||| || Sbjct 1235 TCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTC 1294 Query 66410 TTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAAC 66469 ||||||| ||| ||||||||||||| || || ||||| || || ||||||||||| || Sbjct 1295 TTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAG 1354 Query 66470 GAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGC 66529 | || || ||| |||||| ||||||||||| || || |||||||||||||| Sbjct 1355 GCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGA 1414 Query 66530 AACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC 66589 | ||| || || ||||| || | || ||||| || ||||| || || || Sbjct 1415 AGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCA 1474 Query 66590 CGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC 66648 || || ||| || ||||| || |||||||| ||| |||| ||||| ||||| || Sbjct 1475 CGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTC 1534 Query 66649 -GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATG 66707 | | | || |||| || |||||| ||| | || ||| | ||| |||||| Sbjct 1535 TTGAGAGTATCATAAATA--CCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATG 1592 Query 66708 AACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGT 66767 | || || || | ||| || | || |||||||||||| | || || || ||| Sbjct 1593 AGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGA 1652 Query 66768 AATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCC 66827 | | || ||||| ||||| ||||| | |||| ||||| | || || || | Sbjct 1653 ATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGC 1712 Query 66828 CGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGC 66886 ||| | |||| ||||| | | || || || || || || | | | | || | Sbjct 1713 CGACAGACACA-CGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTG 1771 Query 66887 ATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | | |||||| || || || ||||||| ||||||||| ||| | ||| || Sbjct 1772 AGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTC 1824 >seq3398 Length=5185 Score = 181 bits (200), Expect = 8e-41 Identities = 560/855 (65%), Gaps = 20/855 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | ||||| Sbjct 1830 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATTTA 1771 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || | | || || || ||| | Sbjct 1770 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCTCC 1711 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || ||||| |||||||| ||||| | | || || Sbjct 1710 CACATCCTCGCCTTCTTCGCTGCATCTGACGGCATCGTCAACGAGAACCTTGTCGAGCGA 1651 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | ||||| || || ||||||||||||||||| || Sbjct 1650 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGAT 1592 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | ||||| || || ||||||| ||||| || Sbjct 1591 GGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCTACATCAAGGAGCCTGC 1532 Query 61383 GGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAG 61438 |||| | | | | ||||| ||||| ||||| || || | | | || ||| | Sbjct 1531 TCAACG-AACCTACCTCTTCAACGCCATTGAGACCATCCC--CTG-CATCCGCAAGAAGG 1476 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCT 61496 | || |||||| || ||||| |||| |||| || | |||| | | || | | Sbjct 1475 CCGACTGGGCCATCCGATGGAT--CCAGGACAAGAACTCGTCCTTTGCTCAGCGTCTCGT 1418 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || ||||| | ||||||||| | || ||||| || | |||||| | ||||| ||| | Sbjct 1417 CGCTTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCT 1358 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| ||||| || ||||| || |||||||| ||| ||| | || || || ||||| Sbjct 1357 CAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 1298 Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTC 61676 ||| | || || ||||| | || || | | | || | ||| | Sbjct 1297 GGGTCTTCACACCGACTTTGC---ATGCCTCCTCCACTCCCACCTCAAGGGCCGTGCCAG 1241 Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 || || | || || | || || || || || || ||||| || ||||| Sbjct 1240 CAAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGAC 1181 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 || || | ||| | | || |||||||||| | || ||| |||||| || || Sbjct 1180 CGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCGA 1121 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 || || |||||||| || | |||| | || | || | |||| || | | || Sbjct 1120 GTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAA 1061 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 ||| || || |||||||| | || || || | ||||||||| || || |||||||| || Sbjct 1060 CCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCG 1001 Query 61917 TGTAGGCGACTATCA 61931 ||| || ||||| || Sbjct 1000 TGTCGGTGACTACCA 986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397456658472560