Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680725.1_202016-07-06]
54,001 sequences; 49,886,306 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq3 342 9e-92
seq935 131 3e-28
>seq3
Length=9041
Score = 342 bits (378), Expect = 9e-92
Identities = 200/206 (97%), Gaps = 1/206 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 7728 TACTAAGCTGAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 7786
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7787 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 7846
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 7847 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 7906
Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||| ||||||||||||||
Sbjct 7907 GAACGCTTGGCCGCCACAAGCCAGTT 7932
Score = 159 bits (176), Expect = 6e-37
Identities = 93/95 (98%), Gaps = 1/95 (1%)
Strand=Plus/Plus
Query 202 CAGTT-ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAG 260
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 8315 CAGTTCATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAG 8374
Query 261 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||
Sbjct 8375 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 8409
>seq935
Length=7241
Score = 131 bits (144), Expect = 3e-28
Identities = 84/91 (92%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA--GGGACTAAAGGATC 264
|||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||
Sbjct 5037 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAGATGTCGCCGGGGACTAAAGGATC 4978
Query 265 GATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||| |||||||||||||||||| |||||||
Sbjct 4977 GATAAGCCACACTTTCATGGTTTATATTCAC 4947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 853938615456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |