Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20tucumaniae_20[genbank_20GCA_5F001680725.1_202016-07-06] 54,001 sequences; 49,886,306 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq13449 324 1e-83 seq9934 181 8e-41 >seq13449 Length=2090 Score = 324 bits (358), Expect = 1e-83 Identities = 1130/1736 (65%), Gaps = 42/1736 (2%) Strand=Plus/Plus Query 65216 GACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGATACGACGTCCC 65275 ||||| |||||| ||| | ||| || || |||||||| | || || | || | Sbjct 91 GACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGC 150 Query 65276 GATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGAATCTCCTCAATGTC 65334 || |||||||||||||||||||| ||| | | | ||||| || || | |||| Sbjct 151 GAAATCTCCCAGACGGTCTTGTAGAGG-GCCTTGACCTCGGCGGGGATGTTGGGGATGTT 209 Query 65335 CTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCTGACCACAAACCCAA 65394 ||||| ||||| ||||| || || || ||| | || ||||||| |||| Sbjct 210 CTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCAT 269 Query 65395 ATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAACTCGCCGGACAGTACA 65452 || | ||| | |||| | || | | |||| ||| ||||||||||| | || ||| Sbjct 270 GTCAACAAGGTCCTTGAGC--AGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACA 327 Query 65453 CGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGG 65512 || || ||||||||||| ||| || || ||| | || ||||||| || || || Sbjct 328 CGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGC 387 Query 65513 GCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCA 65572 | |||| ||||| ||||| || || | || || ||| || | |||| | | Sbjct 388 GAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTG 447 Query 65573 ATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCAC 65632 | | | || | | ||||||| ||| | | | | | | | || || |||| Sbjct 448 ACCTGCTCCCGGAGGTTCTCCCAGTCCCAGA---GGTCA--GAAGGCTTC-ACATTCCAC 501 Query 65633 ATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCC 65692 || || || || | || | ||| || || || ||| | ||| ||| Sbjct 502 ATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCC 561 Query 65693 TCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAAT 65751 ||||||||||| || || || | | | ||| || ||| || ||||||||||| || Sbjct 562 TCCTCCTTGGCCAGCTGCACCGAAGCAGT-GAGGGCAGCATGGTAGATGGTCTCGAAGAT 620 Query 65752 GCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGT 65811 | || || ||||| ||||| |||| | ||||| | || | |||| Sbjct 621 CTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAAGC 680 Query 65812 GTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGC 65871 || || ||||| || || |||| ||| ||||| || || |||| ||| | || Sbjct 681 ATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGC 740 Query 65872 CTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATG 65931 || | |||||||||| || | |||||||| | |||| ||||| || || || Sbjct 741 TTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTG 800 Query 65932 CACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGAC 65989 || ||||| ||| | | ||| ||| | || | |||| ||| || Sbjct 801 TGTGA--CGTCGTGCAACTTCTGGAAGTCATAGCA---AGCATCATCGT-AGTTGATGA- 853 Query 65990 ACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCG 66049 || || || ||||| ||||| || |||||||||||||| | ||| ||||| ||| Sbjct 854 ---ACGAA----GGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCG 906 Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 ||||||| ||| |||||||| ||||| || || |||||||||| |||| || Sbjct 907 CAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGG 966 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || |||||||| ||||| |||||||| | |||| | || |||||||||| || Sbjct 967 TTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGC 1026 Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTG 66229 | ||| | |||||| | ||| || | ||||||| || | | | |||| | Sbjct 1027 GCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGT-CTTGCGACCCTTGCCCGC 1085 Query 66230 CGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACT--TCGGACAGACAT 66286 | | || || | |||||| || ||||| | | | ||||| |||| ||||| Sbjct 1086 CTTCTCATACTTTTCGTAAAGAGCCTCGAAC--TCCTCGCCATAGCAGTCGGCCAGACCG 1143 Query 66287 GGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAAT 66346 || |||| || |||||||| || | ||| ||||| | || || ||||| ||| || Sbjct 1144 GGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAG 1203 Query 66347 AGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGA 66406 ||||| || |||||||| || ||| || ||||| || || |||||| ||||||| Sbjct 1204 AGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGG 1263 Query 66407 TTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCG 66466 || ||||||| ||| ||||||||||||| || || ||||| || || ||||||||||| Sbjct 1264 TTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCA 1323 Query 66467 AACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACA 66526 || | || || ||| |||||| ||||||||||| || || |||||||||||| Sbjct 1324 AAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACA 1383 Query 66527 CGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT 66586 || | ||| || || ||||| || | || ||||| || ||||| || || Sbjct 1384 CGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTG 1443 Query 66587 GCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA- 66645 || || || ||| || ||||| || |||||||| ||| |||| ||||| ||||| Sbjct 1444 GCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAG 1503 Query 66646 ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGC 66704 || | | | || |||| || |||||| ||| | || ||| | ||| ||| Sbjct 1504 GTCTTGAGAGTATCATAAATA--CCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGC 1561 Query 66705 ATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAA 66764 |||| || || || | ||| || | || |||||||||||| | || || || | Sbjct 1562 ATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGA 1621 Query 66765 AGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAA 66824 || | | || ||||| ||||| ||||| | |||| ||||| | || || | Sbjct 1622 AGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGA 1681 Query 66825 TCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATA 66883 | |||| | |||| ||||| | | || || || || || || | | | | || Sbjct 1682 TGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATC 1740 Query 66884 TGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | | | |||||| || || || ||||||| ||||||||| ||| | ||| || Sbjct 1741 TTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTC 1796 >seq9934 Length=2663 Score = 181 bits (200), Expect = 8e-41 Identities = 560/855 (65%), Gaps = 20/855 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | ||||| Sbjct 930 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATTTA 871 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || | | || || || ||| | Sbjct 870 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCTCC 811 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || ||||| |||||||| ||||| | | || || Sbjct 810 CACATCCTCGCCTTCTTCGCTGCATCTGACGGCATCGTCAACGAGAACCTTGTCGAGCGA 751 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | ||||| || || ||||||||||||||||| || Sbjct 750 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGAT 692 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | ||||| || || ||||||| ||||| || Sbjct 691 GGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCTACATCAAGGAGCCTGC 632 Query 61383 GGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAG 61438 |||| | | | | ||||| ||||| ||||| || || | | | || ||| | Sbjct 631 TCAACG-AACCTACCTCTTCAACGCCATTGAGACCATCCC--CTG-CATCCGCAAGAAGG 576 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCT 61496 | || |||||| || ||||| |||| |||| || | |||| | | || | | Sbjct 575 CCGACTGGGCCATCCGATGGAT--CCAGGACAAGAACTCGTCCTTTGCTCAGCGTCTCGT 518 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || ||||| | ||||||||| | || ||||| || | |||||| | ||||| ||| | Sbjct 517 CGCTTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCT 458 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| ||||| || ||||| || |||||||| ||| ||| | || || || ||||| Sbjct 457 CAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 398 Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTC 61676 ||| | || || ||||| | || || | | | || | ||| | Sbjct 397 GGGTCTTCACACCGACTTTGC---ATGCCTCCTCCACTCCCACCTCAAGGGCCGTGCCAG 341 Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 || || | || || | || || || || || || ||||| || ||||| Sbjct 340 CAAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGAC 281 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 || || | ||| | | || |||||||||| | || ||| |||||| || || Sbjct 280 CGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCGA 221 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 || || |||||||| || | |||| | || | || | |||| || | | || Sbjct 220 GTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAA 161 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 ||| || || |||||||| | || || || | ||||||||| || || |||||||| || Sbjct 160 CCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCG 101 Query 61917 TGTAGGCGACTATCA 61931 ||| || ||||| || Sbjct 100 TGTCGGTGACTACCA 86 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397306345714640