Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq692 367 2e-99 seq112 136 6e-30 seq445 102 1e-19 >seq692 Length=8001 Score = 367 bits (406), Expect = 2e-99 Identities = 239/259 (92%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4204 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 4263 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| Sbjct 4264 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 4322 Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | ||| || | || |||||||||||||||||||||||||||||||||||| |||| Sbjct 4323 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 4381 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 4382 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 4441 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 4442 AAAGAGCTCTCAATCTGTC 4460 >seq112 Length=5402168 Score = 136 bits (150), Expect = 6e-30 Identities = 101/117 (86%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| | |||||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct 5180182 CTCGCTTGCTCCGTCAGCGTAGCGCGCGTGTGGCCCAGAACATCTAAGGGCATCACAGAC 5180123 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 ||||||||| ||||||||| || |||| | |||| | || || ||||| |||||| Sbjct 5180122 CTGTTATTGTCTCAAACTTAAATCGGCTTG-AGCCGAGGGTTCCCCTAAGGAGCCAG 5180067 >seq445 Length=5615321 Score = 102 bits (112), Expect = 1e-19 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 184 AGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAG 243 |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 4822027 AGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAAG 4822086 Query 244 A 244 | Sbjct 4822087 A 4822087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796794504072