Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq692 443 4e-122 seq112 147 4e-33 seq702 141 2e-31 >seq692 Length=8001 Score = 443 bits (490), Expect = 4e-122 Identities = 284/309 (92%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | ||| |||||||||| Sbjct 4369 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 4310 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4309 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 4250 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| ||| Sbjct 4249 GATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTACTT--CCTTGTCCG 4192 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 4191 AAAGGTCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 4132 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 4131 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 4072 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 4071 CCCTTTGTA 4063 >seq112 Length=5402168 Score = 147 bits (162), Expect = 4e-33 Identities = 101/114 (89%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 70 GGCTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||| ||||| || || ||||||||||||||| ||||||||| ||||||||||||||| Sbjct 5180069 GGCTCCTTAGGGGAACCCTCGGCTCAAGCCGATTTAAGTTTGAGACAATAACAGGTCTGT 5180128 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG 183 ||||||||||||||||||||||| |||||||||||| ||||| |||| | |||| Sbjct 5180129 GATGCCCTTAGATGTTCTGGGCCACACGCGCGCTACGCTGACGGAGCAAGCGAG 5180182 >seq702 Length=2747775 Score = 141 bits (156), Expect = 2e-31 Identities = 123/152 (81%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 98 CCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACG 157 |||||| ||||| ||||| ||||||||| || ||| |||||| |||| | |||||| Sbjct 2127609 CCGATGCCGGTTTGGGGCAAATACAGGTCTGGGACGCCTTTAGATATTCTTGATCGCACG 2127668 Query 158 CGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTT 217 |||| ||||||| |||||| ||| | || ||||| ||| ||||| |||||||||| Sbjct 2127669 CGCGTGACACTGATGGAGCCAGCGACT--ATTTCCTTGCCCGAAAGGTTCGGGTAATCTT 2127726 Query 218 GTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||||||||||||||| || ||||||||||||| Sbjct 2127727 GTTAAACTCTGTCGTCCTTGGGATAGAGCATT 2127758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947193255936