Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq692 242 6e-62 seq112 197 2e-48 seq691 163 5e-38 >seq692 Length=8001 Score = 242 bits (268), Expect = 6e-62 Identities = 227/282 (80%), Gaps = 14/282 (5%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| ||||||||||||||||||||| |||| |||||| Sbjct 445 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 388 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 387 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 328 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| |||||| | | || |||| | ||| |||| | |||||||||||||| | Sbjct 327 GAACGCGGTGATAC-CACCCGCACGT-ATAGACGGACAAGAATAGGCTTCGGCTTTGTGT 270 Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||||||||| | | |||| || |||||||| | | | | | ||| || Sbjct 269 CTTAGCAGGCGATTCTTCCACGGCGCTC-----GAAGCGCGTCGTGGT-ATTTCGCGTAT 216 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || ||||||| || | || ||| |||||||||||||||||| Sbjct 215 TGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 174 >seq112 Length=5402168 Score = 197 bits (218), Expect = 2e-48 Identities = 146/165 (88%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| |||||||||||||||||||||||||| |||||| Sbjct 5172610 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCGGGCAGT 5172553 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 5172552 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCTATGCCA 5172493 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAG 165 ||||| |||||| | | || ||| | ||| |||| | |||||| Sbjct 5172492 GAACGCGGTGATAC-CACCCGCATGT-ATAGACGGACAAGAATAG 5172450 >seq691 Length=3034478 Score = 163 bits (180), Expect = 5e-38 Identities = 131/154 (85%), Gaps = 3/154 (2%) Strand=Plus/Minus Query 20 ATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTG 79 ||||||| ||||||||||||||||||||||||||| |||| |||| ||||||||||||| Sbjct 2003860 ATTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAACCAGTACCGCAAAGCTACCATCTG 2003802 Query 80 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCC 139 || ||| ||||||||||| ||| ||||||||||||||||| ||| | |||||| | | || Sbjct 2003801 CTAGATAATGGCTGAACGACTCCAAGTCAGAATCCATGCCGGAAAGCGGTGATAC-CACC 2003743 Query 140 TGCACATCGTAGTCGGATACGAATAGGCTTCGGC 173 |||| | ||| ||| | |||||||||||||| Sbjct 2003742 CGCAC-GCATAGATGGACAAGAATAGGCTTCGGC 2003710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819194349568