Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq223 300 1e-76 seq667 206 2e-48 >seq223 Length=6419709 Score = 300 bits (332), Expect = 1e-76 Identities = 1213/1888 (64%), Gaps = 52/1888 (3%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| || | |||||| |||| || | ||| |||||||||||||| Sbjct 1880896 ATCAACAGTGAACTGAATAGGGGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGT 1880955 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||||||| ||| | || ||||| || | || |||| | | || | Sbjct 1880956 CTTGAGGCCAAGCTTCCAGCCCGCAAAGTGCATAC-TGGTGATCTTGCCCATCGTGGGGT 1881014 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || |||| ||||| |||||| ||| | || ||||| ||||||| Sbjct 1881015 CCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAAGGCGCCTCGATCAGCAGCCA 1881074 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | || || | || || |||||||| || ||||| ||||| | | | || || Sbjct 1881075 TCTGAACGACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATACAGA-GCCTTGACATCG 1881133 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 || || | ||||| ||| | |||||| ||||| ||||| || ||| Sbjct 1881134 GCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATA 1881193 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACG-ATTGATGACTT 65432 | || ||||||| ||||| |||| ||| | |||| | || | | ||||| || | Sbjct 1881194 GCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC--AGCCAGGGATTGACAACCT 1881251 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 ||||||| || | || ||||| || ||||| ||||| ||| ||| || ||| | | Sbjct 1881252 GGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACT 1881311 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | ||||||| ||||| |||| ||| ||||| ||||| ||||| | | || || Sbjct 1881312 CGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGT 1881371 Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCA-ATTCGTCCCAGTTCCACATCGGTTTA 65611 | || | |||| | | | | | || | | || ||||||| ||| | | | | Sbjct 1881372 TACGGATGCCGTGTGTCTTGACTTCCTCTCGAAGAGTC-TCCCAGTCCCAGA---GGTCA 1881427 Query 65612 TCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG 65671 | | | | ||| ||||||||| || ||| | || || || ||||| Sbjct 1881428 GAG--GGCTTG-ACGTTCCACATATCAAACTGGAGGATACCCTCGGAGGTGGGGGAACCC 1881484 Query 65672 AGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCA 65731 ||| | ||| |||||||| ||||| || || | || ||| || ||| Sbjct 1881485 TTGAAGGTGGAGTAGGGACCCTCCTCTTTGGCCAGCTGCACGGAGGCAGTGAGAGCAGCA 1881544 Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGC 65791 |||||||||||| || || | || || ||||| ||||| |||| | ||| Sbjct 1881545 TGATAAATGGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGC 1881604 Query 65792 ATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 |||| || | |||| || ||||| || ||||| |||| ||| ||||| || || Sbjct 1881605 ATACGCAGAGCAAGGAAAGCATCAGCCAGGCCCTGAACACCAAGACCAATGGGTCGGTGG 1881664 Query 65852 CGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGAT 65909 |||| || | || || |||| | |||||||||| || | |||||| || | Sbjct 1881665 CGCATGTT--ACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGT 1881722 Query 65910 TCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTT-TA 65968 ||| ||||| | || || || || | || || | || || Sbjct 1881723 TCAGGTTGCGAATAACAACCTGACTGACCCTGTGCNNNNNNNNNNCTTCTTGAAGTCGTA 1881782 Query 65969 GGACG----ATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTT 66024 | | | |||| || | || ||| || | ||||| |||||||| Sbjct 1881783 GCAAGCCTCATCGTAGTTGATG---------AAGGAGGGTAGAGACAGAGAGGCGAGGTT 1881833 Query 66025 GCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCA 66084 ||||||||| | ||||||||| || ||||||| |||||| ||||| || || || Sbjct 1881834 GCAGACAGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCT 1881893 Query 66085 GCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCAT 66144 || ||||| || | |||| ||| || |||||||| ||||| ||||||||||| | ||| Sbjct 1881894 TCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCAT 1881953 Query 66145 GTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTT 66204 | | || | ||||||||| |||| ||||| ||||||| ||| || | ||||| Sbjct 1881954 GAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCACAGCTTCTGAGCCTT 1882013 Query 66205 CACCGTACGTACCGCCCT-ACCTTTGCGTTC--GTAATGTTCGTAGAGGTGTTCGAAGGA 66261 | || | | | |||| ||| || ||| ||| | |||||| || || || Sbjct 1882014 GATGGT-CTTGCGACCCTTACCC--GCCTTCTCGTACTTTTCGTACAGAGCCTCAAACTC 1882070 Query 66262 TTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACC 66321 || || | |||| || | || |||| || || |||||||| | ||| ||||| Sbjct 1882071 CTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTAGGGCACATCAGTGTCCAGTCACC 1882130 Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381 | || ||| || || ||| || ||||| || ||||| ||||| ||| || || || Sbjct 1882131 GTTCTTTTCAACGCGCTTCATGAAAAGATCGGGGATCCAAAGGGCAAGGAAAAGGTCACG 1882190 Query 66382 TGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGC 66441 || || |||||| | ||||| || || || | || ||||| || |||| |||| Sbjct 1882191 GGCACGAACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAATTCGAAGACATCGGA 1882250 Query 66442 ATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGG----- 66496 ||||| || || ||||||||||| || | || || ||| |||||| ||| Sbjct 1882251 GTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGNNNNN 1882310 Query 66497 -TCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTT 66555 | || ||||| |||||||| ||||| | ||| || || | ||||| ||| | Sbjct 1882311 NNNNNCATACCGAGCAGTGTTGTTGAACACACGAAGCATAGGAACAACACCGTTCGATGT 1882370 Query 66556 GCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAAT 66615 || ||||| ||| ||||| || || || || ||| ||| |||||||||||||| Sbjct 1882371 ACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAGACCAAT 1882430 Query 66616 ACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCA 66673 |||||| ||| |||| ||||| ||||| || | | | || | | || || ||| Sbjct 1882431 ACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC--GTAGATTCCCTCA 1882488 Query 66674 ATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCG 66733 || |||| |||| || | | | |||| || | |||||| | || ||| || Sbjct 1882489 ATACTGTCATCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCG 1882548 Query 66734 GCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTC 66793 || |||||| ||||| | ||| ||||| ||| | | || ||||| |||||| ||| Sbjct 1882549 GCGTTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTGGACATCAGATTGTATGTC 1882608 Query 66794 TCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTA 66852 || | ||| || || | || || || || | | |||| ||||| | | || Sbjct 1882609 TCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACACA-CGCATGATCATGTG 1882667 Query 66853 TTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTT 66912 ||||| || ||||| | | | | | || | | | ||| || || |||| ||||| Sbjct 1882668 CTGAGGGCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTATGATCGCTCCAAAGTCTT 1882727 Query 66913 GATACCAAAGTACGAGTAATTGAAATCG 66940 || |||||||| ||| | ||||||| Sbjct 1882728 GAAGCCAAAGTATTGGTATTGGAAATCG 1882755 >seq667 Length=3682606 Score = 206 bits (228), Expect = 2e-48 Identities = 565/856 (66%), Gaps = 22/856 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || |||||||||||||| | |||||| | ||| | Sbjct 2045847 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 2045788 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 |||||||| | | |||||| | || | | | ||| || ||| | Sbjct 2045787 TCCAAAGATCTCCACGACTGGAACAACCGCCTGACTGCTGATGAGCAGTTCTTCGTCTCT 2045728 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || || ||||| ||||| ||||| | | || ||| Sbjct 2045727 CACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCGT 2045668 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| ||||| || | | ||||| ||||| ||||||||||||||||| ||| Sbjct 2045667 TTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATG 2045608 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| | ||||| |||| ||| | || ||||| || ||||||| ||||| || Sbjct 2045607 GAGAACATTCACTCCGAGACCTACTCCCTCCTAATCGACACCTACATCAAGGAGCCCGCC 2045548 Query 61384 GAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA----G 61438 | || | | | | ||||| ||||| ||||| || || || | | |||| | Sbjct 2045547 CAGCG-AACCTACCTCTTCAACGCCATTGAGACCATTCC----CTGCATCCGAAAGAAGG 2045493 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCT 61496 | || |||||| || ||||| ||| | || | || | |||| |||| | | Sbjct 2045492 CTGACTGGGCCATCCGATGGAT--CCAAGATAAGGACTCCTCCTTTGCCCAACGTCTCGT 2045435 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || || || | || || ||| | || ||||| || | || ||| | ||||| ||| | Sbjct 2045434 TGCCTTCGCTGCTGTTGAAGGTATCTTCTTCAGCGGTGCCTTCGCCTCTATCTTCTGGCT 2045375 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| ||||| || |||||||||||||||||| ||| ||| | || || || ||||| Sbjct 2045374 CAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGA 2045315 Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCCGT 61675 ||| | || ||| ||||| | || || || || | || | |||| | Sbjct 2045314 GGGTCTTCACACTGACTTTGC---CTGCCTCCTC-CACTCTCACCTCAAGGGTCGTGCCA 2045259 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 || || | || || | ||| || || || || || ||||| || || | Sbjct 2045258 GCAAGCAGATGATCCAGGATATCATCACTGACGCCGTCACCATTGAGCAGGAGTTCCTCA 2045199 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 |||| ||| | ||| | ||| |||||||||| | || || ||| |||||| |||| Sbjct 2045198 CTGAGGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTG 2045139 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 | || || || || ||||| | |||| | | || | || | |||| || | | | Sbjct 2045138 AGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCACCA 2045079 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 |||| || || |||||||| | || || |||| |||||||| || || |||||||| | Sbjct 2045078 ACCCCTTCGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGC 2045019 Query 61916 GTGTAGGCGACTATCA 61931 | || | |||||| || Sbjct 2045018 GCGTTGCCGACTACCA 2045003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564550103680