Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq334 109 2e-18 >seq334 Length=5800717 Score = 109 bits (120), Expect = 2e-18 Identities = 214/314 (68%), Gaps = 2/314 (1%) Strand=Plus/Plus Query 12733 AACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACC 12792 ||||||||| ||| ||| ||||| || | | ||| || ||||| || | ||||||||| Sbjct 1050719 AACATCGTAGTAGATAACGTTCATACCCATAGCCTCAGCGAGGACGGACAGCTGAGAACC 1050778 Query 12793 AATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGA 12852 ||||| || || || || ||||| || ||||| |||| || || | || || | ||| Sbjct 1050779 AATGTGGCCGTAGCCAACAATACCCAGAGTCTTGCCTCGAATCTCCCAGC-ACTTGGAGC 1050837 Query 12853 AG-TCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAA 12911 | ||||||||| | ||| |||| | || ||| || ||| |||| |||||| | || Sbjct 1050838 TGACCTTGTTCCAGGTTCCTCGGTGCATCTCGTTGGATCGATCGCCAAGCTGACGGGCAA 1050897 Query 12912 GATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAAT 12971 || || | | | |||| ||||| || || || | | |||| ||||| || | Sbjct 1050898 GAACGATGATCTCAGCGATGACCAGCTCAGCAACACTGCGCGAGTTGGCGAAGGGGGAGT 1050957 Query 12972 TAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGC 13031 | ||||| || || || |||| || | || || | ||||| | | || || | Sbjct 1050958 TGAAGACGGCGATACCATTCTTGGCGGCGAACTCGAGGTCGACCTGGTTGGTGCCGATAC 1051017 Query 13032 AGAAGCATCCTATG 13045 ||||||| || ||| Sbjct 1051018 AGAAGCAGCCGATG 1051031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884869205123816