Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq3 167 1e-39
seq12518 131 9e-29
seq18292 91.5 8e-17
>seq3
Length=4379
Score = 167 bits (184), Expect = 1e-39
Identities = 108/117 (92%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| || |||||||| |||||| || ||
Sbjct 3180 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAAT-ATAACACCGTCC 3238
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3239 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3295
>seq12518
Length=902
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||||| ||||| || |||||| ||
Sbjct 140 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 199
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||| |||||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct 200 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 256
>seq18292
Length=424
Score = 91.5 bits (100), Expect = 8e-17
Identities = 68/80 (85%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 38 GAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGA 97
|||||| | | |||||| || ||||||||||||||| ||||| |||| |||||||||
Sbjct 3 GAGTCATCAAAAGAACATCTGCCAATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGA 62
Query 98 CGGTATCTGATCGTCTTCGA 117
|||||||| |||||||||||
Sbjct 63 CGGTATCTAATCGTCTTCGA 82
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278345236980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |