Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06] 20,982 sequences; 49,446,642 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq3 167 1e-39 seq12518 131 9e-29 seq18292 91.5 8e-17 >seq3 Length=4379 Score = 167 bits (184), Expect = 1e-39 Identities = 108/117 (92%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| || |||||||| |||||| || || Sbjct 3180 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAAT-ATAACACCGTCC 3238 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3239 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3295 >seq12518 Length=902 Score = 131 bits (144), Expect = 9e-29 Identities = 99/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| ||||| || |||||| || Sbjct 140 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 199 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 200 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 256 >seq18292 Length=424 Score = 91.5 bits (100), Expect = 8e-17 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 38 GAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGA 97 |||||| | | |||||| || ||||||||||||||| ||||| |||| ||||||||| Sbjct 3 GAGTCATCAAAAGAACATCTGCCAATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGA 62 Query 98 CGGTATCTGATCGTCTTCGA 117 |||||||| ||||||||||| Sbjct 63 CGGTATCTAATCGTCTTCGA 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278345236980