Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq3 731 0.0
seq19963 194 7e-47
seq7205 82.4 3e-13
>seq3
Length=4379
Score = 731 bits (810), Expect = 0.0
Identities = 565/663 (85%), Gaps = 10/663 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 1763 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 1704
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 1644
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1643 TGAAAAGAACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 1584
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
| |||||||||| | |||| ||| || || ||| | |||||||||||| | |
Sbjct 1583 GTGACCAGACTTGGGCTTGGTTGATCATCCAGGGTTCTC-CCTGGTGCACTCTTCCG-GC 1526
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||||||||||| | | | | |||||||||| |||||||||||| |||| ||||
Sbjct 1525 CCAGGCCAGCATCAGTTTGCCCCGGGGGATAAAGGCGTCGGGAATGTGGCTCCCTCCGGG 1466
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381
| |||||||||||||| | | ||| | | | |||||||||| ||||| || ||
Sbjct 1465 GAGTGTTATAGCCCGGCGCGCAATACCCTGAGGC-GGACTGAGGTTCGCGCATTCGCAAG 1407
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
||||||||||||||||| | || | ||||||||| |||||||||||||||||| | |
Sbjct 1406 GATGCTGGCGTAATGGTCATCAGTGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCTT 1348
Query 442 C-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500
| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| ||
Sbjct 1347 CGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA- 1289
Query 501 CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560
| || ||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1288 ---GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAGTAAGAGCAT 1232
Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620
| | |||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 1231 ACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACT 1172
Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||
Sbjct 1171 CTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGG 1112
Query 681 CGA 683
|||
Sbjct 1111 CGA 1109
>seq19963
Length=256
Score = 194 bits (214), Expect = 7e-47
Identities = 182/229 (79%), Gaps = 16/229 (7%)
Strand=Plus/Minus
Query 402 AAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT 461
|| || ||||||||| |||||||||||||||||||||||| ||||||||| |||||
Sbjct 222 AATCGACCCGTCTTGTAACACGGACCAAGGAGTCTAACATGTATGCGAGTTGGCGGGTGG 163
Query 462 CAAACCCGTGCGCGTAATGAAAGTGAACGGAGG--TGGG----AACCCGTGAGGGTGCAC 515
|||||||| ||| || || ||| || || |||| ||||| |||||
Sbjct 162 AAAACCCGTAAGCGCAAGTAACCTGACTGGTGGGATGGGGTAAAACCC-------TGCAC 110
Query 516 CATCGACCGATCCTGATGT--CTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACC 573
|||||||||| | || ||| || || | || ||||||| ||||||| |||||||||||
Sbjct 109 CATCGACCGACCATGTTGTTTCTACGAAAGG-TTTGAGTGCGAGCATACCTGTTGGGACC 51
Query 574 CGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622
|||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 50 CGAAAGATGGTGAACTATGCCTGAGCAGGGTGAAGCCAGAGGAAACTCT 2
>seq7205
Length=2488
Score = 82.4 bits (90), Expect = 3e-13
Identities = 108/145 (74%), Gaps = 5/145 (3%)
Strand=Plus/Plus
Query 206 ACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGGTC- 263
|||||||||| | |||| ||| || || ||| | ||||| |||||| |||||
Sbjct 83 ACCAGACTTGGGCTTGGTTGATCACCCAGGGTTCTCT-CTGGTGCGCTCTTC--CGGTCC 139
Query 264 AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGG 323
||||||||||||| | | | | |||||||| | ||||||| |||| |||| | |||
Sbjct 140 AGGCCAGCATCAGTTTGCCCCGGGGGATAAAGACGTCGGGAATCTGGCTCCCTCCAGGGA 199
Query 324 GTGTTATAGCCCGGGGTGGAATGCG 348
|||||||||||| | ||| ||| ||
Sbjct 200 GTGTTATAGCCCAGCGTGTAATACG 224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079549936100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |