Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06] 20,982 sequences; 49,446,642 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq3 731 0.0 seq19963 194 7e-47 seq7205 82.4 3e-13 >seq3 Length=4379 Score = 731 bits (810), Expect = 0.0 Identities = 565/663 (85%), Gaps = 10/663 (2%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 1763 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 1704 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1703 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 1644 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1643 TGAAAAGAACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 1584 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261 | |||||||||| | |||| ||| || || ||| | |||||||||||| | | Sbjct 1583 GTGACCAGACTTGGGCTTGGTTGATCATCCAGGGTTCTC-CCTGGTGCACTCTTCCG-GC 1526 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||||| | | | | |||||||||| |||||||||||| |||| |||| Sbjct 1525 CCAGGCCAGCATCAGTTTGCCCCGGGGGATAAAGGCGTCGGGAATGTGGCTCCCTCCGGG 1466 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381 | |||||||||||||| | | ||| | | | |||||||||| ||||| || || Sbjct 1465 GAGTGTTATAGCCCGGCGCGCAATACCCTGAGGC-GGACTGAGGTTCGCGCATTCGCAAG 1407 Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 ||||||||||||||||| | || | ||||||||| |||||||||||||||||| | | Sbjct 1406 GATGCTGGCGTAATGGTCATCAGTGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCTT 1348 Query 442 C-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500 | |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| || Sbjct 1347 CGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA- 1289 Query 501 CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560 | || ||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1288 ---GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGATGGATTTGAGTAAGAGCAT 1232 Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620 | | |||||||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct 1231 ACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACT 1172 Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 ||||||||||||||||||||||||| ||||||||||||||||||||| |||| || |||| Sbjct 1171 CTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGG 1112 Query 681 CGA 683 ||| Sbjct 1111 CGA 1109 >seq19963 Length=256 Score = 194 bits (214), Expect = 7e-47 Identities = 182/229 (79%), Gaps = 16/229 (7%) Strand=Plus/Minus Query 402 AAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT 461 || || ||||||||| |||||||||||||||||||||||| ||||||||| ||||| Sbjct 222 AATCGACCCGTCTTGTAACACGGACCAAGGAGTCTAACATGTATGCGAGTTGGCGGGTGG 163 Query 462 CAAACCCGTGCGCGTAATGAAAGTGAACGGAGG--TGGG----AACCCGTGAGGGTGCAC 515 |||||||| ||| || || ||| || || |||| ||||| ||||| Sbjct 162 AAAACCCGTAAGCGCAAGTAACCTGACTGGTGGGATGGGGTAAAACCC-------TGCAC 110 Query 516 CATCGACCGATCCTGATGT--CTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACC 573 |||||||||| | || ||| || || | || ||||||| ||||||| ||||||||||| Sbjct 109 CATCGACCGACCATGTTGTTTCTACGAAAGG-TTTGAGTGCGAGCATACCTGTTGGGACC 51 Query 574 CGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 50 CGAAAGATGGTGAACTATGCCTGAGCAGGGTGAAGCCAGAGGAAACTCT 2 >seq7205 Length=2488 Score = 82.4 bits (90), Expect = 3e-13 Identities = 108/145 (74%), Gaps = 5/145 (3%) Strand=Plus/Plus Query 206 ACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGGTC- 263 |||||||||| | |||| ||| || || ||| | ||||| |||||| ||||| Sbjct 83 ACCAGACTTGGGCTTGGTTGATCACCCAGGGTTCTCT-CTGGTGCGCTCTTC--CGGTCC 139 Query 264 AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGG 323 ||||||||||||| | | | | |||||||| | ||||||| |||| |||| | ||| Sbjct 140 AGGCCAGCATCAGTTTGCCCCGGGGGATAAAGACGTCGGGAATCTGGCTCCCTCCAGGGA 199 Query 324 GTGTTATAGCCCGGGGTGGAATGCG 348 |||||||||||| | ||| ||| || Sbjct 200 GTGTTATAGCCCAGCGTGTAATACG 224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079549936100