Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06] 20,982 sequences; 49,446,642 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq9 342 9e-92 seq20675 271 1e-70 seq14893 271 1e-70 seq652 131 3e-28 >seq9 Length=3953 Score = 342 bits (378), Expect = 9e-92 Identities = 200/206 (97%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 1490 TACTAAGCTGAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1432 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1431 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 1372 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1371 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 1312 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||||||| |||||||||||||| Sbjct 1311 GAACGCTTGGCCGCCACAAGCCAGTT 1286 Score = 163 bits (180), Expect = 5e-38 Identities = 92/93 (99%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 203 AGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGA 262 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 901 AGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGA 842 Query 263 TCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||| Sbjct 841 TCGATAGGCCACACTTTCATGGTTTGTATTCAC 809 >seq20675 Length=204 Score = 271 bits (300), Expect = 1e-70 Identities = 179/197 (91%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| ||||||| || | || ||||| | ||||||||||||||||||||||||| Sbjct 8 TACTGAGCCGAATTACTATGGCGGAATCGGTCCAACAGTAGGGTAAAACTAACCTGTCTC 67 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 68 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 127 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 128 AATGCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 187 Query 180 TGAACGCTTGGCTGCCA 196 ||||||||||||||||| Sbjct 188 TGAACGCTTGGCTGCCA 204 >seq14893 Length=403 Score = 271 bits (300), Expect = 1e-70 Identities = 177/195 (91%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 99 TGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAG 158 ||||||| ||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct 1 TGAACAACCCAACGCTTGGTGAATGCTGCTTCACAATGATAGGAAGAGCCGACATCGAAG 60 Query 159 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 120 Query 219 ACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTT 278 ||||||||| |||||||||| || |||| ||| || ||||||||||| |||||||| ||| Sbjct 121 ACTTTTCTGACACCTCTAGCTTCGAATTCCGAAGGTCTAAAGGATCGTTAGGCCACGCTT 180 Query 279 TCATGGTTTGTATTC 293 ||| |||| |||||| Sbjct 181 TCACGGTTCGTATTC 195 >seq652 Length=7833 Score = 131 bits (144), Expect = 3e-28 Identities = 84/91 (92%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA--GGGACTAAAGGATC 264 |||||||||||||||||||||||||||||||||||| || ||| |||||||||||||| Sbjct 1529 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAGATGTCGCCGGGGACTAAAGGATC 1588 Query 265 GATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||| |||||||||||||||||| ||||||| Sbjct 1589 GATAAGCCACACTTTCATGGTTTATATTCAC 1619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854220729792