Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06] 20,982 sequences; 49,446,642 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq6553 325 3e-84 seq3424 181 8e-41 >seq6553 Length=2786 Score = 325 bits (360), Expect = 3e-84 Identities = 1208/1856 (65%), Gaps = 54/1856 (3%) Strand=Plus/Minus Query 65102 GCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAG 65161 || || |||| || | || ||||||||||| ||||| ||||| | | | ||| Sbjct 2785 GCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCC-GAGCTTCCAGCCGGC 2727 Query 65162 AAA-TGCATCGATGATAATTTTGCATAAT-TCGGCTCGGCCACATGCATATTCAACGACT 65219 ||| ||||| | || | || |||| | | || || || || || || | |||| Sbjct 2726 AAAGTGCAT-GCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGACT 2668 Query 65220 GACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGATACGACGTCCCGATA 65279 | |||||| ||| | ||| || || |||||||| | || || | || ||| | Sbjct 2667 GGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAAA 2608 Query 65280 TCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTGG 65338 ||||||||||||||||||| ||| | | | ||||| || || | |||| |||| Sbjct 2607 TCTCCCAGACGGTCTTGTAGAGG-GCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTGG 2549 Query 65339 ACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCG 65398 | ||||| ||||| || || || ||| | || ||||||| |||| || Sbjct 2548 ATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTCA 2489 Query 65399 ATAAGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAACTCGCCGGACAGTACACGAC 65456 | ||| | |||| | || | | |||| ||| ||||||||||| | || ||||| | Sbjct 2488 ACAAGGTCCTTGAGC--AGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGGC 2431 Query 65457 GGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAG 65516 | ||||||||||| ||| || || ||| | || ||||||| || || || | || Sbjct 2430 GCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAG 2371 Query 65517 TAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGT--TCATTTCAAT 65574 || ||||| ||||| || || | || || ||| || | |||| || || | Sbjct 2370 TACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCT 2311 Query 65575 GTTG--TGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCAC 65632 | | ||| | ||| ||||||| ||| | | | | | | | || || |||| Sbjct 2310 GCTCCCTGAGG---TTC-TCCCAGTCCCAGA---GGTCA--GAAGGCTTC-ACATTCCAC 2261 Query 65633 ATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCC 65692 || || || || | || | ||| || || || ||| | ||| ||| Sbjct 2260 ATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCC 2201 Query 65693 TCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAAT 65751 ||||||||||| || || || | | | ||| || ||| || ||||||||||| || Sbjct 2200 TCCTCCTTGGCCAGCTGCACCGAAGCAGT-GAGGGCAGCATGGTAGATGGTCTCGAAGAT 2142 Query 65752 GCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGT 65811 | || || ||||| ||||| |||| | ||||| | || | |||| Sbjct 2141 CTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAAGC 2082 Query 65812 GTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGC 65871 || || ||||| || || |||| ||| ||||| || || |||| ||| | || Sbjct 2081 ATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGC 2022 Query 65872 CTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATG 65931 || | |||||||||| || | |||||||| | |||| ||||| || || || Sbjct 2021 TTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTG 1962 Query 65932 CACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGAC 65989 || ||||| ||| | | ||| ||| | || | |||| ||| || Sbjct 1961 TGTGA--CGTCGTGCAACTTCTGGAAGTCATAGCA---AGCATCATCGT-AGTTGATGA- 1909 Query 65990 ACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCG 66049 || || || ||||| ||||| || |||||||||||||| | ||| ||||| ||| Sbjct 1908 ---ACGAA----GGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCG 1856 Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 ||||||| ||| |||||||| ||||| || || |||||||||| |||| || Sbjct 1855 CAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGG 1796 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || |||||||| ||||| |||||||| | |||| | || |||||||||| || Sbjct 1795 TTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGC 1736 Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTG 66229 | ||| | |||||| | ||| || | ||||||| || | | | |||| | Sbjct 1735 GCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGT-CTTGCGACCCTTGCCCGC 1677 Query 66230 CGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACT--TCGGACAGACAT 66286 | | || || | |||||| || ||||| | | | ||||| |||| ||||| Sbjct 1676 CTTCTCATACTTTTCGTAAAGAGCCTCGAAC--TCCTCGCCATAGCAGTCGGCCAGACCG 1619 Query 66287 GGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAAT 66346 || |||| || |||||||| || | ||| ||||| | || || ||||| ||| || Sbjct 1618 GGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAG 1559 Query 66347 AGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGA 66406 ||||| || |||||||| || ||| || ||||| || || |||||| ||||||| Sbjct 1558 AGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGG 1499 Query 66407 TTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCG 66466 || ||||||| ||| ||||||||||||| || || ||||| || || ||||||||||| Sbjct 1498 TTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCA 1439 Query 66467 AACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACA 66526 || | || || ||| |||||| ||||||||||| || || |||||||||||| Sbjct 1438 AAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACA 1379 Query 66527 CGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT 66586 || | ||| || || ||||| || | || ||||| || ||||| || || Sbjct 1378 CGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTG 1319 Query 66587 GCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA- 66645 || || || ||| || ||||| || |||||||| ||| |||| ||||| ||||| Sbjct 1318 GCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAG 1259 Query 66646 ATC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGC 66704 || | | | || |||| || |||||| ||| | || ||| | ||| ||| Sbjct 1258 GTCTTGAGAGTATCATAAATA--CCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGC 1201 Query 66705 ATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAA 66764 |||| || || || | ||| || | || |||||||||||| | || || || | Sbjct 1200 ATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGA 1141 Query 66765 AGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAA 66824 || | | || ||||| ||||| ||||| | |||| ||||| | || || | Sbjct 1140 AGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGA 1081 Query 66825 TCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATA 66883 | |||| | |||| ||||| | | || || || || || || | | | | || Sbjct 1080 TGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATC 1022 Query 66884 TGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | | | |||||| || || || ||||||| ||||||||| ||| | ||| || Sbjct 1021 TTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTC 966 >seq3424 Length=5400 Score = 181 bits (200), Expect = 8e-41 Identities = 560/855 (65%), Gaps = 20/855 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | ||| | Sbjct 3365 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 3424 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | | |||||| | || | | || || || ||| | Sbjct 3425 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCTCC 3484 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| || || || ||||| |||||||| ||||| | | || || Sbjct 3485 CACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGCGA 3544 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | ||||| || || ||||||||||||||||| || Sbjct 3545 TTCA-GCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGAT 3603 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | ||||| || || ||||||| ||||| || Sbjct 3604 GGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCTACATCAAGGAGCCAGC 3663 Query 61383 GGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAG 61438 |||| | | | | ||||| ||||| ||||| || || | || | || ||| | Sbjct 3664 TCAACG-AACCTACCTCTTCAACGCCATTGAGACCATCCC--CTGT-ATCCGCAAGAAGG 3719 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCT 61496 | || |||||| || ||||| |||| |||| || | |||| | | || | | Sbjct 3720 CCGACTGGGCCATCCGATGGAT--CCAGGACAAGAACTCGTCCTTTGCTCAGCGTCTCGT 3777 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 || ||||| | ||||||||| | || ||||| || | |||||| | ||||| ||| | Sbjct 3778 CGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCT 3837 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||| ||||| || ||||| || |||||||| ||| ||| | || || || ||||| Sbjct 3838 CAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 3897 Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTC 61676 ||| | || || ||||| | || || | | | || | ||| | Sbjct 3898 GGGTCTTCACACCGACTTTGC---ATGCCTCCTCCACTCCCACCTCAAGGGCCGTGCCAG 3954 Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 || || | || || | || || || || || || ||||| || ||||| Sbjct 3955 CAAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGAC 4014 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 || || | ||| | | || |||||||||| | || ||| |||||| || || Sbjct 4015 CGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCGA 4074 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 || || |||||||| || | |||| | || | || | |||| || | | || Sbjct 4075 GTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAA 4134 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 ||| || || |||||||| | || || || | ||||||||| || || |||||||| || Sbjct 4135 CCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCG 4194 Query 61917 TGTAGGCGACTATCA 61931 ||| || ||||| || Sbjct 4195 TGTCGGTGACTACCA 4209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397466334656480