Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq5 167 1e-39 seq20687 113 3e-23 >seq5 Length=3444 Score = 167 bits (184), Expect = 1e-39 Identities = 108/117 (92%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| || |||||||| |||||| || || Sbjct 1831 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAAT-ATAACACCGTCC 1773 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1772 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1716 >seq20687 Length=280 Score = 113 bits (124), Expect = 3e-23 Identities = 91/110 (83%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 8 AAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCT 67 || ||||||||||||| || ||||||| ||||| || |||||| ||||||||| Sbjct 1 AAAACTTTGATTTCTCATAGGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCCGATCCCT 60 Query 68 AGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 61 GGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278334003540