Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06]
25,286 sequences; 50,152,336 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq5 167 1e-39
seq20687 113 3e-23
>seq5
Length=3444
Score = 167 bits (184), Expect = 1e-39
Identities = 108/117 (92%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| || |||||||| |||||| || ||
Sbjct 1831 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAAT-ATAACACCGTCC 1773
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1772 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1716
>seq20687
Length=280
Score = 113 bits (124), Expect = 3e-23
Identities = 91/110 (83%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 8 AAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCT 67
|| ||||||||||||| || ||||||| ||||| || |||||| |||||||||
Sbjct 1 AAAACTTTGATTTCTCATAGGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCCGATCCCT 60
Query 68 AGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct 61 GGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278334003540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |