Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq5 367 2e-99 seq18646 206 4e-51 seq18387 165 1e-38 >seq5 Length=3444 Score = 367 bits (406), Expect = 2e-99 Identities = 239/259 (92%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2215 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2156 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| Sbjct 2155 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 2097 Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | ||| || | || |||||||||||||||||||||||||||||||||||| |||| Sbjct 2096 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 2038 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 2037 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 1978 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 1977 AAAGAGCTCTCAATCTGTC 1959 >seq18646 Length=384 Score = 206 bits (228), Expect = 4e-51 Identities = 169/203 (83%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 176 CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 235 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 ||||||||||||||||||||| | || ||| | ||||||||||||||||| ||| Sbjct 236 CTGTTATTGCCTCAAACTTCCGCGGCCTAAAAGGCCGTAGTCCCTCTAAGAAGCTGGCCG 295 Query 123 CCAA-CCATA-GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | || ||| || |||| |||||||| | ||||||||||||||| |||||||| Sbjct 296 CGAAGGGATACCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTA 355 Query 181 ACCAGACAAATCACTCCACCAAC 203 |||||||||||| |||||||||| Sbjct 356 ACCAGACAAATCGCTCCACCAAC 378 >seq18387 Length=529 Score = 165 bits (182), Expect = 1e-38 Identities = 124/142 (87%), Gaps = 3/142 (2%) Strand=Plus/Plus Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| Sbjct 378 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 436 Query 121 CACCAACCATAGTCGATGGGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | ||| || | || || |||||||| |||||||||||||||||||||||| |||| Sbjct 437 GTACTGCCAAAG-CAATACGGACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATT 495 Query 180 AACCAGACAAATCACTCCACCA 201 || ||||||||||||||||||| Sbjct 496 AAGCAGACAAATCACTCCACCA 517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796604817366