Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq6 497 2e-138 seq20767 331 2e-88 seq21711 150 3e-34 seq1249 131 3e-28 >seq6 Length=3992 Score = 497 bits (550), Expect = 2e-138 Identities = 288/295 (98%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 3123 TACTAAGCTGAATTACCATTGCGGCGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 3065 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3064 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 3005 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 3004 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 2945 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2944 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 2885 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2884 CAAATGTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 2830 >seq20767 Length=206 Score = 331 bits (366), Expect = 2e-88 Identities = 191/196 (97%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 100 GAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGG 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10 GAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGG 69 Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAA 219 |||||||||| |||||||||||| |||| ||| ||||||||||||||||||||||||||| Sbjct 70 ATCAAAAAGCGACGTCGCTATGACCGCTGGGCCGCCACAAGCCAGTTATCCCTGTGGTAA 129 Query 220 CTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTT 279 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 130 CTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATCGATAGGCCACACTTT 189 Query 280 CATGGTTTGTATTCAC 295 |||||||||||||||| Sbjct 190 CATGGTTTGTATTCAC 205 >seq21711 Length=276 Score = 150 bits (166), Expect = 3e-34 Identities = 98/108 (91%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 186 CTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAAT 245 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||| Sbjct 1 CTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCGAAT 60 Query 246 TTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| || ||||||||||| |||||||| |||||| |||| |||||| Sbjct 61 TCCGAAGGTCTAAAGGATCGTTAGGCCACGCTTTCACGGTTCGTATTC 108 >seq1249 Length=6219 Score = 131 bits (144), Expect = 3e-28 Identities = 84/91 (92%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA--GGGACTAAAGGATC 264 |||||||||||||||||||||||||||||||||||| || ||| |||||||||||||| Sbjct 1775 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAGATGTCGCCGGGGACTAAAGGATC 1834 Query 265 GATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||| |||||||||||||||||| ||||||| Sbjct 1835 GATAAGCCACACTTTCATGGTTTATATTCAC 1865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854183956416