Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5 443 4e-122 seq18646 304 2e-80 seq18387 138 2e-30 >seq5 Length=3444 Score = 443 bits (490), Expect = 4e-122 Identities = 284/309 (92%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | ||| |||||||||| Sbjct 2050 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 2109 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2110 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 2169 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||| |||||| ||||| | | ||||||||| Sbjct 2170 GATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGT--ACCTCCTTGGCCG 2227 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 |||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2228 AAAGGCCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 2287 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 2288 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 2347 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 2348 CCCTTTGTA 2356 >seq18646 Length=384 Score = 304 bits (336), Expect = 2e-80 Identities = 261/318 (82%), Gaps = 16/318 (5%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCG------CTTTGGCGGGTCGCCGGCT 73 || |||||||| | |||||||| |||| | || | || |||| || ||| Sbjct 342 GAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGG----CCAGCT 287 Query 74 TCTTAGAGGGACTATCGGC---TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| |||| | | |||| |||||||||||||||||||||||||||| Sbjct 286 TCTTAGAGGGACTA-CGGCCTTTTAGGCCGC-GGAAGTTTGAGGCAATAACAGGTCTGTG 229 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| | ||||||| | || Sbjct 228 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGCTTATAG 169 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| ||| | |||||||||| | ||| | ||||| |||||||||| ||||| Sbjct 168 CCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTG 110 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||||||| | Sbjct 109 CAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACT 50 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 49 ACGTCCCTGCCCTTTGTA 32 >seq18387 Length=529 Score = 138 bits (152), Expect = 2e-30 Identities = 94/106 (89%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| | | |||||||| | ||| |||||||||| Sbjct 483 GAACGAGACCTTAACCTACTAAATAGTCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 424 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 423 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946960491008