Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06]
25,286 sequences; 50,152,336 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq5 443 4e-122
seq18646 304 2e-80
seq18387 138 2e-30
>seq5
Length=3444
Score = 443 bits (490), Expect = 4e-122
Identities = 284/309 (92%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||| ||||||||||
Sbjct 2050 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 2109
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2110 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 2169
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||||||||||||| |||||| ||||| | | |||||||||
Sbjct 2170 GATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGT--ACCTCCTTGGCCG 2227
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
|||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2228 AAAGGCCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 2287
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 2288 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 2347
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 2348 CCCTTTGTA 2356
>seq18646
Length=384
Score = 304 bits (336), Expect = 2e-80
Identities = 261/318 (82%), Gaps = 16/318 (5%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCG------CTTTGGCGGGTCGCCGGCT 73
|| |||||||| | |||||||| |||| | || | || |||| || |||
Sbjct 342 GAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGG----CCAGCT 287
Query 74 TCTTAGAGGGACTATCGGC---TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| |||| | | |||| ||||||||||||||||||||||||||||
Sbjct 286 TCTTAGAGGGACTA-CGGCCTTTTAGGCCGC-GGAAGTTTGAGGCAATAACAGGTCTGTG 229
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||||||||||||||||||||||||||||| | ||||||| | ||
Sbjct 228 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGCTTATAG 169
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||||||||| ||| | |||||||||| | ||| | ||||| |||||||||| |||||
Sbjct 168 CCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTG 110
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||||||| |
Sbjct 109 CAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACT 50
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 49 ACGTCCCTGCCCTTTGTA 32
>seq18387
Length=529
Score = 138 bits (152), Expect = 2e-30
Identities = 94/106 (89%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||| |||||||| | | |||||||| | ||| ||||||||||
Sbjct 483 GAACGAGACCTTAACCTACTAAATAGTCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 424
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 946960491008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |